RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 FBXL13Q8NEE6 735 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 SHKBP1Q8TBC3 707 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 SLC35C1Q96A29 364 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 BCO2Q9BYV7 579 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 NIF3L1Q9GZT8 377 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 APOBEC3GQ9HC16 384 aaKnown RBP13.77□□□□□ -0.21
COL5A1-206ENST00000465877 GDE1Q9NZC3 331 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 HMGXB4Q9UGU5 601 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 A0A1W2PRU2 124 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 GPR37L1O60883 481 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 LRRN2O75325 713 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 MICAL2O94851 1124 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 FAM163BP0C2L3 166 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 GJA1P17302 382 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 GABRR2P28476 465 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 MAGEA11P43364 429 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 TEAD2Q15562 447 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 POTEHQ6S545 545 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 PARM1Q6UWI2 310 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 TRIM67Q6ZTA4 783 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 DNAJB7Q7Z6W7 309 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-206ENST00000465877 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 ST13P5Q8NFI4 369 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-206ENST00000465877 GPR152Q8TDT2 470 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 GIPC2Q8TF65 315 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 NXPE3Q969Y0 559 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 MCRS1Q96EZ8 462 aa13.76□□□□□ -0.21
COL5A1-206ENST00000465877 METTL14Q9HCE5 456 aaKnown RBP13.76□□□□□ -0.21
COL5A1-206ENST00000465877 PRR33A8MZF0 331 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 NARSO43776 548 aaKnown RBP13.75□□□□□ -0.21
COL5A1-206ENST00000465877 FGF19O95750 216 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 BDNFP23560 247 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 FCARP24071 287 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 RPL10AP62906 217 aaKnown RBP13.75□□□□□ -0.21
COL5A1-206ENST00000465877 INCA1Q0VD86 236 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 ORC1Q13415 861 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 TAF12Q16514 161 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 DPCR1Q3MIW9 517 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 STXBP5Q5T5C0 1151 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 SDHAF4Q5VUM1 108 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 VSTM1Q6UX27 236 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 SCN4BQ8IWT1 228 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 ASIC4Q96FT7 647 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 TNIP3Q96KP6 325 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 GCNAQ96QF7 691 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 LRFN3Q9BTN0 628 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 SLITRK6Q9H5Y7 841 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 IL21Q9HBE4 155 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 RAB20Q9NX57 234 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 MAGEC2Q9UBF1 373 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-206ENST00000465877 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
COL5A1-206ENST00000465877 ATP8B3O60423 1300 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 TMEM221A6NGB7 291 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 M0R296 226 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 NOL4O94818 638 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 CSH1P0DML2 217 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 CSH2P0DML3 217 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 HMGA1P17096 107 aaKnown RBP13.74□□□□□ -0.21
COL5A1-206ENST00000465877 PTPN1P18031 435 aaKnown RBP13.74□□□□□ -0.21
COL5A1-206ENST00000465877 CDC25CP30307 473 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 FMO5P49326 533 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 NDST1P52848 882 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 MARSP56192 900 aaKnown RBP13.74□□□□□ -0.21
COL5A1-206ENST00000465877 CYP4F8P98187 520 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 DDR2Q16832 855 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 FAM35AQ86V20 835 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 UNC93AQ86WB7 457 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 MLKLQ8NB16 471 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 TRMT2BQ96GJ1 504 aaKnown RBP13.74□□□□□ -0.21
COL5A1-206ENST00000465877 ASB16Q96NS5 453 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 ZNF518BQ9C0D4 1074 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 ATXN3LQ9H3M9 355 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-206ENST00000465877 COQ4Q9Y3A0 265 aa13.74□□□□□ -0.21
COL5A1-206ENST00000465877 NCANO14594 1321 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 SLC38A8A6NNN8 435 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 TRIM66O15016 1216 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 TADA3O75528 432 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 GNA14O95837 355 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 MBD3O95983 291 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 SRFP11831 508 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 CCDC130P13994 396 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 CD58P19256 250 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ANXA13P27216 316 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 CACNA2D1P54289 1103 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ARHGAP15Q53QZ3 475 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 FAM78AQ5JUQ0 283 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 TRIM59Q8IWR1 403 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 SLC44A3Q8N4M1 653 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms