RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 WHAMMQ8TF30 809 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 FUBP3Q96I24 572 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHPF2-202ENST00000465601 FAXDC2Q96IV6 333 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 NT5C1BQ96P26 610 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 MYADMQ96S97 322 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 ELOVL4Q9GZR5 314 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 ABCB6Q9NP58 842 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 CISHQ9NSE2 258 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 NR2E1Q9Y466 385 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 DENND4CQ5VZ89 1909 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 CILPO75339 1184 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 MYL4P12829 197 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
CHPF2-202ENST00000465601 MYL5Q02045 173 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 CUL2Q13617 745 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 SLC5A9Q2M3M2 681 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 CFAP221Q4G0U5 840 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 VWA3BQ502W6 1294 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 TCP11X2Q5H9J9 407 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 CYP4A22Q5TCH4 519 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 OTOP3Q7RTS5 596 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 CRYBG2Q8N1P7 616 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 C12orf29Q8N999 325 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 TCEAL4Q96EI5 215 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 NT5C1AQ9BXI3 368 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 ZNF518BQ9C0D4 1074 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
CHPF2-202ENST00000465601 USTQ9Y2C2 406 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 MRPS23Q9Y3D9 190 aaKnown RBP13.18□□□□□ -0.3
CHPF2-202ENST00000465601 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
CHPF2-202ENST00000465601 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 GJA1P17302 382 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 GRIK1P39086 918 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 CCR2P41597 374 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 MAGEA11P43364 429 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 NCAPHQ15003 741 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 TAF12Q16514 161 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 MIIPQ5JXC2 388 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 GBP6Q6ZN66 633 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ARHGEF19Q8IW93 802 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 PPM1KQ8N3J5 372 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 AOPEPQ8N6M6 819 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ING5Q8WYH8 240 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 KAT5Q92993 513 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ASAH2Q9NR71 780 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 TAB2Q9NYJ8 693 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 LIMD1Q9UGP4 676 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 MUC3AQ02505 3323 aa13.17□□□□□ -0.3
CHPF2-202ENST00000465601 ZNF197O14709 1029 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 MOSPD3O75425 235 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 CCDC130P13994 396 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 CEBPBP17676 345 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 SLC9A1P19634 815 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 TBXAS1P24557 533 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-202ENST00000465601 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 RAD23BP54727 409 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 EPHA5P54756 1037 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 KRT31Q15323 416 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 PRSS36Q5K4E3 855 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 PHLDB3Q6NSJ2 640 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 TMC8Q8IU68 726 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 TTC39CQ8N584 583 aa13.16□□□□□ -0.3
CHPF2-202ENST00000465601 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms