RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 VIPR2P41587 438 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 MAGEA11P43364 429 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 PRKCQQ04759 706 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 MAPRE1Q15691 268 aaKnown RBP12.84□□□□□ -0.35
TMCO3-205ENST00000465556 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 INTS8Q75QN2 995 aaKnown RBP12.84□□□□□ -0.35
TMCO3-205ENST00000465556 CCDC105Q8IYK2 499 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 RSPRY1Q96DX4 576 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 TIGD1Q96MW7 591 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 GSDMAQ96QA5 445 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 FOXQ1Q9C009 403 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
TMCO3-205ENST00000465556 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
TMCO3-205ENST00000465556 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
TMCO3-205ENST00000465556 MYO15AQ9UKN7 3530 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 FAM186AA6NE01 2351 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 STK25O00506 426 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 NOL4O94818 638 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 PRAMEF12O95522 483 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 PDGFRBP09619 1106 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 FAM163BP0C2L3 166 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 KRT13P13646 458 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 RPL13P26373 211 aaKnown RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 RAP1GAPP47736 663 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 VAMP7P51809 220 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 NLRP12P59046 1061 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 STARD6P59095 220 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 DDR2Q16832 855 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 COBLL1Q53SF7 1204 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 VSTM1Q6UX27 236 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 SV2AQ7L0J3 742 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 TMEM150AQ86TG1 271 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 SCN4BQ8IWT1 228 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 PJA1Q8NG27 643 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 OR6B3Q8NGW1 331 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 SPATA20Q8TB22 786 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 E2F7Q96AV8 911 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 TRMT2BQ96GJ1 504 aaKnown RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 SHDQ96IW2 340 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 TRMT61BQ9BVS5 477 aaKnown RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 DPEP3Q9H4B8 488 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 BRD9Q9H8M2 597 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 MAGED2Q9UNF1 606 aaPredicted RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 PCDHA5Q9Y5H7 936 aa12.83□□□□□ -0.36
TMCO3-205ENST00000465556 RIF1Q5UIP0 2472 aaKnown RBP12.83□□□□□ -0.36
TMCO3-205ENST00000465556 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 SLC38A8A6NNN8 435 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 IKBKBO14920 756 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 ASS1P00966 412 aaKnown RBP12.82□□□□□ -0.36
TMCO3-205ENST00000465556 HLA-DRAP01903 254 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 BDNFP23560 247 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 GDI1P31150 447 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
TMCO3-205ENST00000465556 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
TMCO3-205ENST00000465556 PRCPP42785 496 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 CYP27A1Q02318 531 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 ENPEPQ07075 957 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 FCHO2Q0JRZ9 810 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 SLC44A4Q53GD3 710 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 TPRG1Q6ZUI0 275 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 ARID3BQ8IVW6 561 aaPredicted RBP12.82□□□□□ -0.36
TMCO3-205ENST00000465556 MFSD6LQ8IWD5 586 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 B3GALNT2Q8NCR0 500 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 IRF7Q92985 503 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 ELMO3Q96BJ8 720 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 ELOVL4Q9GZR5 314 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 HEBP1Q9NRV9 189 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 MAGEC2Q9UBF1 373 aaPredicted RBP12.82□□□□□ -0.36
TMCO3-205ENST00000465556 UXTQ9UBK9 157 aaPredicted RBP12.82□□□□□ -0.36
TMCO3-205ENST00000465556 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
TMCO3-205ENST00000465556 MYOFQ9NZM1 2061 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 KANSL1LA0AUZ9 987 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 A8MXQ7 604 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 ARNTLO00327 626 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 GADD45BO75293 160 aaPredicted RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 F11P03951 625 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 P4HA1P13674 534 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 PTPN1P18031 435 aaKnown RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 DDX6P26196 483 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 WEE1P30291 646 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 GCLMP48507 274 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 CDH8P55286 799 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms