RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 EHHADHQ08426 723 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 SMARCB1Q12824 385 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 FAM26FQ5R3K3 315 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 LIMS2Q7Z4I7 341 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 LEO1Q8WVC0 666 aaPredicted RBP23.19■■□□□ 1.3
EDEM1-205ENST00000465187 SCFD1Q8WVM8 642 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 HPDLQ96IR7 371 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 GCNAQ96QF7 691 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 CYP2S1Q96SQ9 504 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 C8orf33Q9H7E9 229 aaPredicted RBP23.19■■□□□ 1.3
EDEM1-205ENST00000465187 CRTAC1Q9NQ79 661 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 AGPAT3Q9NRZ7 376 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 PCDHA7Q9UN72 937 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 ATP6V1DQ9Y5K8 247 aa23.19■■□□□ 1.3
EDEM1-205ENST00000465187 ZNF233A6NK53 670 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 K7ESF4 209 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 POLR2DO15514 142 aaKnown RBP23.18■■□□□ 1.3
EDEM1-205ENST00000465187 CST3P01034 146 aaPredicted RBP23.18■■□□□ 1.3
EDEM1-205ENST00000465187 CYP2J2P51589 502 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 MYL7Q01449 175 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 TOP6BLQ8N6T0 577 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 CELF5Q8N6W0 485 aaKnown RBP23.18■■□□□ 1.3
EDEM1-205ENST00000465187 ZNF507Q8TCN5 953 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 ELMO3Q96BJ8 720 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 ANKRD36BP1Q96IX9 119 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 C7orf25Q9BPX7 421 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 FAM83CQ9BQN1 747 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 EBF3Q9H4W6 596 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 POLR3BQ9NW08 1133 aaPredicted RBP23.18■■□□□ 1.3
EDEM1-205ENST00000465187 NCDNQ9UBB6 729 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 CEP250Q9BV73 2442 aa23.18■■□□□ 1.3
EDEM1-205ENST00000465187 KIAA1549LQ6ZVL6 1849 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 CHURC1-FNTBB4DL54 471 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 NOL4O94818 638 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 PDGFRBP09619 1106 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 CXCL12P48061 93 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 FNTBP49356 437 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 MLLT6P55198 1093 aaPredicted RBP23.17■■□□□ 1.3
EDEM1-205ENST00000465187 CUL4BQ13620 913 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 CCINQ13939 588 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 NFE2Q16621 373 aaPredicted RBP23.17■■□□□ 1.3
EDEM1-205ENST00000465187 HEATR6Q6AI08 1181 aaKnown RBP23.17■■□□□ 1.3
EDEM1-205ENST00000465187 RALGPS2Q86X27 583 aaPredicted RBP23.17■■□□□ 1.3
EDEM1-205ENST00000465187 SCN4BQ8IWT1 228 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 TMEM86AQ8N2M4 240 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 TTC16Q8NEE8 873 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 MRPL45Q9BRJ2 306 aaKnown RBP23.17■■□□□ 1.3
EDEM1-205ENST00000465187 PARD6AQ9NPB6 346 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 EML5Q05BV3 1969 aa23.17■■□□□ 1.3
EDEM1-205ENST00000465187 EIF3DO15371 548 aaKnown RBP eCLIP23.16■■□□□ 1.3
EDEM1-205ENST00000465187 CSH1P0DML2 217 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 CSH2P0DML3 217 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 DLATP10515 647 aaKnown RBP23.16■■□□□ 1.3
EDEM1-205ENST00000465187 AVPR1AP37288 418 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 AFMP43652 599 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 CCR3P51677 355 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 KRT85P78386 507 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 SNRNP35Q16560 246 aaKnown RBP23.16■■□□□ 1.3
EDEM1-205ENST00000465187 ITPRIPL2Q3MIP1 535 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 CNNM4Q6P4Q7 775 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 FAM171BQ6P995 826 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 MAMSTRQ6ZN01 415 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 TRAPPC11Q7Z392 1133 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 SPATA2LQ8IUW3 424 aaPredicted RBP23.16■■□□□ 1.3
EDEM1-205ENST00000465187 IQUBQ8NA54 791 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 PLEKHO2Q8TD55 490 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 ZNF516Q92618 1163 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 MYLPFQ96A32 169 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 SYT15Q9BQS2 421 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 CUEDC2Q9H467 287 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 FBRSL1Q9HCM7 1045 aaKnown RBP23.16■■□□□ 1.3
EDEM1-205ENST00000465187 ABCB6Q9NP58 842 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 SLC39A2Q9NP94 309 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 TDP1Q9NUW8 608 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 CACNA1AO00555 2505 aa23.16■■□□□ 1.3
EDEM1-205ENST00000465187 C2orf78A6NCI8 922 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 HRO43593 1189 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 TNNC2P02585 160 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 TGM1P22735 817 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 ME1P48163 572 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 CASP4P49662 377 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 USP46P62068 366 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 UNC13DQ70J99 1090 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 MON1AQ86VX9 555 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 WDR49Q8IV35 697 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 SPEM1Q8N4L4 309 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 CCDC127Q96BQ5 260 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 TRPC7Q9HCX4 862 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 TMEM30AQ9NV96 361 aa23.15■■□□□ 1.3
EDEM1-205ENST00000465187 MED19A0JLT2 244 aaPredicted RBP23.14■■□□□ 1.29
EDEM1-205ENST00000465187 KIAA0391O15091 583 aaKnown RBP23.14■■□□□ 1.29
EDEM1-205ENST00000465187 BDNFP23560 247 aa23.14■■□□□ 1.29
EDEM1-205ENST00000465187 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.29
EDEM1-205ENST00000465187 LHX1P48742 406 aa23.14■■□□□ 1.29
EDEM1-205ENST00000465187 CACNA2D1P54289 1103 aa23.14■■□□□ 1.29
EDEM1-205ENST00000465187 RPL10AP62906 217 aaKnown RBP23.14■■□□□ 1.29
EDEM1-205ENST00000465187 CYP24A1Q07973 514 aa23.14■■□□□ 1.29
EDEM1-205ENST00000465187 RUNX3Q13761 415 aa23.14■■□□□ 1.29
EDEM1-205ENST00000465187 LRRC32Q14392 662 aa23.14■■□□□ 1.29
EDEM1-205ENST00000465187 DUOXA2Q1HG44 320 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms