RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 STRA6Q9BX79 667 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 SMOC1Q9H4F8 434 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 KIF9Q9HAQ2 790 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 RBAKQ9NYW8 714 aaPredicted RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 STK17AQ9UEE5 414 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 FBXO2Q9UK22 296 aaPredicted RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 SNX9Q9Y5X1 595 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 ACACBO00763 2458 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 ATG2BQ96BY7 2078 aa16.46■□□□□ 0.22
CMSS1-202ENST00000463526 TADA3O75528 432 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 AMPD2Q01433 879 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 PSMD2Q13200 908 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 INTS6LQ5JSJ4 861 aaKnown RBP16.45■□□□□ 0.22
CMSS1-202ENST00000463526 SPATA2LQ8IUW3 424 aaPredicted RBP16.45■□□□□ 0.22
CMSS1-202ENST00000463526 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 SLC22A12Q96S37 553 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 P2RY13Q9BPV8 354 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 CBWD1Q9BRT8 395 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 FGFBP2Q9BYJ0 223 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 PDE11AQ9HCR9 933 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 RXFP3Q9NSD7 469 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
CMSS1-202ENST00000463526 SEL1LQ9UBV2 794 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 PCDHB13Q9Y5F0 798 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 NUP210Q8TEM1 1887 aaPredicted RBP16.45■□□□□ 0.22
CMSS1-202ENST00000463526 EPG5Q9HCE0 2579 aa16.45■□□□□ 0.22
CMSS1-202ENST00000463526 KIF26AQ9ULI4 1882 aaPredicted RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 PRPF6O94906 941 aaKnown RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 LDHAP00338 332 aaKnown RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 CKMP06732 381 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 GJA4P35212 333 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 TXLNAP40222 546 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 IFNAR2P48551 515 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 RBP5P82980 135 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 MTF1Q14872 753 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 PDGFRLQ15198 375 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 ADGRF2Q8IZF7 708 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 CPA6Q8N4T0 437 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 ARL14EPQ8N8R7 260 aaPredicted RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 MTMR12Q9C0I1 747 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 UXTQ9UBK9 157 aaPredicted RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 SRPRBQ9Y5M8 271 aaKnown RBP16.44■□□□□ 0.22
CMSS1-202ENST00000463526 WNT6Q9Y6F9 365 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 RALGAPA1Q6GYQ0 2036 aa16.44■□□□□ 0.22
CMSS1-202ENST00000463526 TCHHQ07283 1943 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 TRAV19A0A0A6YYK7 116 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 ATP2C2O75185 946 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 NOL4O94818 638 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 USP17L7P0C7H9 530 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 TMEM191BP0C7N4 346 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 DRD1P21728 446 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 GARTP22102 1010 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 ZNF268Q14587 947 aaPredicted RBP16.43■□□□□ 0.22
CMSS1-202ENST00000463526 TMEM86AQ8N2M4 240 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 LRRC52Q8N7C0 313 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 RPLP0P6Q8NHW5 317 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 LEO1Q8WVC0 666 aaPredicted RBP16.43■□□□□ 0.22
CMSS1-202ENST00000463526 PKMYT1Q99640 499 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 ECT2Q9H8V3 914 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 PANK4Q9NVE7 773 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 SIX4Q9UIU6 781 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 ITGA11Q9UKX5 1188 aa16.43■□□□□ 0.22
CMSS1-202ENST00000463526 C2orf78A6NCI8 922 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 DCLK1O15075 740 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 FOXD2O60548 495 aaPredicted RBP16.42■□□□□ 0.22
CMSS1-202ENST00000463526 EPN2O95208 641 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 ZNF806P0C7X5 589 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 PCSK1P29120 753 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 STAT6P42226 847 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 RAP1GAPP47736 663 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 LHX1P48742 406 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 PSMC1P62191 440 aaKnown RBP16.42■□□□□ 0.22
CMSS1-202ENST00000463526 ZNF77Q15935 545 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 SOWAHAQ2M3V2 549 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 TOP6BLQ8N6T0 577 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 CXorf38Q8TB03 319 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 SH3RF2Q8TEC5 729 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 OSCP1Q8WVF1 389 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 CD101Q93033 1021 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 LOXL4Q96JB6 756 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 LINC00597Q9H2U6 94 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 ABCB6Q9NP58 842 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 GDAP2Q9NXN4 497 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 INVSQ9Y283 1065 aa16.42■□□□□ 0.22
CMSS1-202ENST00000463526 CNOT1A5YKK6 2376 aaKnown RBP16.41■□□□□ 0.22
CMSS1-202ENST00000463526 A0A087X0B3 334 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 CCDC163A0A0D9SF12 145 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 SOBPA7XYQ1 873 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 PDGFRBP09619 1106 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 LMO2P25791 158 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 RESTQ13127 1097 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 GPD1LQ8N335 351 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 CAMKK1Q8N5S9 505 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 PDILTQ8N807 584 aa16.41■□□□□ 0.22
CMSS1-202ENST00000463526 OR5B17Q8NGF7 314 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms