RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 PYROXD1Q8WU10 500 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 PRPF31Q8WWY3 499 aaKnown RBP14.86□□□□□ -0.03
SCFD1-203ENST00000458591 SLC7A3Q8WY07 619 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 GRAMD1AQ96CP6 724 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 PAFAH2Q99487 392 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 TBC1D10AQ9BXI6 508 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 TRIM6Q9C030 488 aaPredicted RBP14.86□□□□□ -0.03
SCFD1-203ENST00000458591 SLC5A4Q9NY91 659 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 DRG1Q9Y295 367 aaKnown RBP14.86□□□□□ -0.03
SCFD1-203ENST00000458591 AFG3L2Q9Y4W6 797 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 MAFGO15525 162 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 FAM189A1O60320 539 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ENTPD5O75356 428 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 AVILO75366 819 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 LRCH4O75427 683 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 MMRN1Q13201 1228 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ANKRD20A2Q5SQ80 823 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ANKRD20A1Q5TYW2 823 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ANKRD20A3Q5VUR7 823 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 CIAPIN1Q6FI81 312 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 SLFN12LQ6IEE8 588 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 DRICH1Q6PGQ1 229 aaPredicted RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 DLK2Q6UY11 383 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 BZW1Q7L1Q6 419 aaKnown RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ZNF276Q8N554 614 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 TMEM35BQ8NCS4 154 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 HSPH1Q92598 858 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 TTC25Q96NG3 672 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 WRNIP1Q96S55 665 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 PSMC3IPQ9P2W1 217 aaPredicted RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 CHMP2BQ9UQN3 213 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 DKC1O60832 514 aaKnown RBP eCLIP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 FAM155BO75949 473 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 MAP3K6O95382 1288 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 PIGRP01833 764 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 CALB1P05937 261 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ITGAVP06756 1048 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 PTPRAP18433 802 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 SKIV2L2P42285 1042 aaKnown RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 GCLCP48506 637 aaPredicted RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 GEMIN4P57678 1058 aaKnown RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 SLC25A11Q02978 314 aaKnown RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 CCDC15Q0P6D6 951 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 EFHC2Q5JST6 749 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 RFWD3Q6PCD5 774 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 NLRP9Q7RTR0 991 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 TRIM50Q86XT4 487 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 CCDC125Q86Z20 511 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 NKD2Q969F2 451 aaPredicted RBP14.85□□□□□ -0.03
SCFD1-203ENST00000458591 PCDH9Q9HC56 1237 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 CYLDQ9NQC7 956 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 GINM1Q9NU53 330 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 TXLNGQ9NUQ3 528 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 HMGXB4Q9UGU5 601 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 WDR81Q562E7 1941 aa14.85□□□□□ -0.03
SCFD1-203ENST00000458591 ARID2Q68CP9 1835 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 PEX11AO75192 247 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 ATP2A2P16615 1042 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 MCL1Q07820 350 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 XRRA1Q6P2D8 792 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 DPH6Q7L8W6 267 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 BRSK2Q8IWQ3 736 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 NAT8LQ8N9F0 302 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 ZNF280CQ8ND82 737 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 MZB1Q8WU39 189 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 RAB3IPQ96QF0 476 aaPredicted RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 IMPG2Q9BZV3 1241 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 LRMDAQ9H2I8 198 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 METTL5Q9NRN9 209 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 B4GALT5O43286 388 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 ADCY3O60266 1144 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 CSDE1O75534 798 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 LDHAP00338 332 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 KRT3P12035 628 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 ABL2P42684 1182 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 NR1H3Q13133 447 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 ZC3H18Q86VM9 953 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 SERAC1Q96JX3 654 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 TWNKQ96RR1 684 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 CPXM1Q96SM3 734 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 XPO7Q9UIA9 1087 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 SMG5Q9UPR3 1016 aaKnown RBP14.84□□□□□ -0.03
SCFD1-203ENST00000458591 SNCAIPQ9Y6H5 919 aa14.84□□□□□ -0.03
SCFD1-203ENST00000458591 A0A0G2JND7 137 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 H0YCG3 227 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 MSCO60682 206 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 ATG7O95352 703 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 ERBB2P04626 1255 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 KRT19P08727 400 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 CHRM1P11229 460 aaPredicted RBP14.83□□□□□ -0.03
SCFD1-203ENST00000458591 KDELR1P24390 212 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 ASPAP45381 313 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 ENPEPQ07075 957 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 PIGHQ14442 188 aaPredicted RBP14.83□□□□□ -0.03
SCFD1-203ENST00000458591 TRIM68Q6AZZ1 485 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 RFX6Q8HWS3 928 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 PALM2Q8IXS6 379 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 AGGF1Q8N302 714 aaeCLIP14.83□□□□□ -0.03
SCFD1-203ENST00000458591 DCAKDQ8WVC6 231 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms