RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 XRRA1Q6P2D8 792 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 TMEM270Q6UE05 265 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 ARHGEF18Q6ZSZ5 1173 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 OR5B17Q8NGF7 314 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 PTPRN2Q92932 1015 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 MAGEB18Q96M61 343 aa14.27□□□□□ -0.12
TOP3B-213ENST00000457179 ATP5HO75947 161 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 CYP24A1Q07973 514 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 CAPSQ13938 189 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 KYNUQ16719 465 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 SEL1L2Q5TEA6 688 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 MFSD5Q6N075 450 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 ZNF365Q70YC5 407 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 SLC9A9Q8IVB4 645 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 UBL4BQ8N7F7 174 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 C1orf54Q8WWF1 131 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 LENG1Q96BZ8 264 aaPredicted RBP14.27□□□□□ -0.13
TOP3B-213ENST00000457179 ADAM33Q9BZ11 813 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 HAPLN2Q9GZV7 340 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 ETNK2Q9NVF9 386 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
TOP3B-213ENST00000457179 PHTF1Q9UMS5 762 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 PCDHGA4Q9Y5G9 962 aa14.27□□□□□ -0.13
TOP3B-213ENST00000457179 ATP2A1O14983 1001 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ANXA13P27216 316 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 FMO1Q01740 532 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CALCOCO2Q13137 446 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 NFIL3Q16649 462 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CMPK2Q5EBM0 449 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 TNFAIP8L3Q5GJ75 292 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 METTL7BQ6UX53 244 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PRUNE1Q86TP1 453 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 RHOT2Q8IXI1 618 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PRELID2Q8N945 189 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ATG4AQ8WYN0 398 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 STMN2Q93045 179 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 TIPINQ9BVW5 301 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 AKT3Q9Y243 479 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 RGPD3A6NKT7 1758 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 RGPD4Q7Z3J3 1758 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 SIGLEC16A6NMB1 481 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PHF2O75151 1096 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 TBX10O75333 385 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CELF2O95319 508 aaKnown RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 VTNP04004 478 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ADORA2AP29274 412 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PTGIRP43119 386 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PSMC4P43686 418 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 INHBCP55103 352 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CCDC15Q0P6D6 951 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 SNAPC2Q13487 334 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ZRSR2Q15696 482 aaKnown RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 BRDTQ58F21 947 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 WDR44Q5JSH3 913 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 OLFML2BQ68BL8 750 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 SDCCAG8Q86SQ7 713 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 LCA5Q86VQ0 697 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ZNF516Q92618 1163 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 INPP5DQ92835 1189 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ZSWIM1Q9BR11 485 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 C1orf112Q9NSG2 853 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ATAD5Q96QE3 1844 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 UMODL1Q5DID0 1318 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 MAP3K7O43318 606 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CYP11B1P15538 503 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ATP5DP30049 168 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 GHRHRQ02643 423 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ALCAMQ13740 583 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PABPC1LQ4VXU2 614 aaKnown RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 ACSBG2Q5FVE4 666 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 C4orf50Q6ZRC1 276 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 MRRFQ96E11 262 aaKnown RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 RUNDC3BQ96NL0 473 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 RRAGCQ9HB90 399 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PARP2Q9UGN5 583 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 MAFBQ9Y5Q3 323 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-213ENST00000457179 WASF2Q9Y6W5 498 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 PSME4Q14997 1843 aa14.26□□□□□ -0.13
TOP3B-213ENST00000457179 CNMDO75829 334 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 CHKAP35790 457 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 MFAP3P55082 362 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 RTP1P59025 263 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 BPIFB4P59827 614 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 IL9RQ01113 521 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 TMED2Q15363 201 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 FAM160B1Q5W0V3 765 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 EFCAB12Q6NXP0 572 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 TRIM42Q8IWZ5 723 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 KBTBD2Q8IY47 623 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 AFG1LQ8WV93 481 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 ABTB1Q969K4 478 aaPredicted RBP14.25□□□□□ -0.13
TOP3B-213ENST00000457179 TUBGCP5Q96RT8 1024 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 MIPEPQ99797 713 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 TMEM109Q9BVC6 243 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 SPATA16Q9BXB7 569 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 HEMGNQ9BXL5 484 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms