RNA–Protein interactions for RNA: ENST00000456662.5

DDX39B-212, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-212ENST00000456662 GCNAQ96QF7 691 aa12.93□□□□□ -0.34
DDX39B-212ENST00000456662 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
DDX39B-212ENST00000456662 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
DDX39B-212ENST00000456662 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
DDX39B-212ENST00000456662 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
DDX39B-212ENST00000456662 KNL1Q8NG31 2342 aa12.93□□□□□ -0.34
DDX39B-212ENST00000456662 PLXND1Q9Y4D7 1925 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 PPEF2O14830 753 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 AP5Z1O43299 807 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 DTNBO60941 627 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 MED24O75448 989 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 HMGB1P09429 215 aaKnown RBP12.92□□□□□ -0.34
DDX39B-212ENST00000456662 PROZP22891 400 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 LRPAP1P30533 357 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 TIE1P35590 1138 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
DDX39B-212ENST00000456662 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 SRSF1Q07955 248 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39B-212ENST00000456662 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 SLC39A12Q504Y0 691 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 DSTYKQ6XUX3 929 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 CLMPQ9H6B4 373 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 IL21RQ9HBE5 538 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39B-212ENST00000456662 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
DDX39B-212ENST00000456662 COL6A6A6NMZ7 2263 aa12.92□□□□□ -0.34
DDX39B-212ENST00000456662 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
DDX39B-212ENST00000456662 A0A1W2PQD8 194 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 TCRBV21S2A2A0A5A6 115 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 WNT7AO00755 349 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 DEXIO95424 95 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 MCF2P10911 925 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 TYMPP19971 482 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 DDX6P26196 483 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 TXKP42681 527 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 IFNAR2P48551 515 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 GPR15P49685 360 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 EVCP57679 992 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 KRT32Q14532 448 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 VEPH1Q14D04 833 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 TAF12Q16514 161 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 ZC2HC1CQ53FD0 456 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 TRIML1Q8N9V2 468 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 BAHD1Q8TBE0 780 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
DDX39B-212ENST00000456662 PNMA5Q96PV4 448 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 CITO14578 2027 aa12.91□□□□□ -0.34
DDX39B-212ENST00000456662 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 TLX3O43711 291 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-212ENST00000456662 TADA3O75528 432 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
DDX39B-212ENST00000456662 MAOBP27338 520 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 ZXDBP98169 803 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 SCRN1Q12765 414 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 NR1H3Q13133 447 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 RABEPKQ7Z6M1 372 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
DDX39B-212ENST00000456662 MRPS31Q92665 395 aaKnown RBP12.9□□□□□ -0.34
DDX39B-212ENST00000456662 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
DDX39B-212ENST00000456662 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
DDX39B-212ENST00000456662 A0A0A0MRY4 1105 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 IGHV1OR15-9A0A0B4J2B8 117 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 GABRG2P18507 467 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 LILRA4P59901 499 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 KCNC4Q03721 635 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 GRIK2Q13002 908 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 USP4Q13107 963 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 SH3RF2Q8TEC5 729 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 KCNB2Q92953 911 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 ZNF419Q96HQ0 510 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-212ENST00000456662 IFT74Q96LB3 600 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 SENP8Q96LD8 212 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 HSPA12BQ96MM6 686 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
DDX39B-212ENST00000456662 FCRL3Q96P31 734 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-212ENST00000456662 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
DDX39B-212ENST00000456662 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-212ENST00000456662 OBSL1O75147 1896 aa12.89□□□□□ -0.35
DDX39B-212ENST00000456662 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms