RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KIAA0319LQ8IZA0 1049 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 CDCA5Q96FF9 252 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 TWNKQ96RR1 684 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 SAYSD1Q9NPB0 183 aa19.35■□□□□ 0.69
SEMA3B-209ENST00000456560 CCT8L1PA6NM43 557 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 VIMP08670 466 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 GHRP10912 638 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 INSRRP14616 1297 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 IL1R2P27930 398 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 PHKA2P46019 1235 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 MORF4L2Q15014 288 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 RNASEH2BQ5TBB1 312 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 JADE1Q6IE81 842 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 FASTKD5Q7L8L6 764 aaKnown RBP19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 XYLT1Q86Y38 959 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 PARP9Q8IXQ6 854 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 CPXM1Q96SM3 734 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 ELOVL4Q9GZR5 314 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 VRTNQ9H8Y1 702 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 RRAGCQ9HB90 399 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 WDR35Q9P2L0 1181 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
SEMA3B-209ENST00000456560 ASB14A6NK59 587 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 PECAM1P16284 738 aaPredicted RBP19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 SCTRP47872 440 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 TNFAIP2Q03169 654 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 ZNF268Q14587 947 aaPredicted RBP19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 LRRC14Q15048 493 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 FUKQ8N0W3 1084 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 SHCBP1Q8NEM2 672 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 MAML1Q92585 1016 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 HAUS1Q96CS2 278 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 ELAC2Q9BQ52 826 aaKnown RBP19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 SMYD3Q9H7B4 428 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 PCDH9Q9HC56 1237 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 ACTL7BQ9Y614 415 aa19.33■□□□□ 0.69
SEMA3B-209ENST00000456560 IQCA1LA6NCM1 817 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 CILPO75339 1184 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 ERBB2P04626 1255 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 KRT7P08729 469 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 BRAFP15056 766 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 PTPN11Q06124 597 aaPredicted RBP19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 WDR78Q5VTH9 848 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 MGARPQ8TDB4 240 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 CKAP2Q8WWK9 683 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 CFAP57Q96MR6 1250 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 PDZD7Q9H5P4 517 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 KCNK9Q9NPC2 374 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 HMGXB4Q9UGU5 601 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 ZSWIM8A7E2V4 1837 aa19.33■□□□□ 0.68
SEMA3B-209ENST00000456560 A0A087WZ62 844 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ITGB3P05106 788 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 KDELR1P24390 212 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 GCAP28676 217 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ATICP31939 592 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 GABRB2P47870 512 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 IGBP1P78318 339 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ORC1Q13415 861 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 PREPLQ4J6C6 727 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 CYP4F22Q6NT55 531 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 BBS12Q6ZW61 710 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 RPAINQ86UA6 219 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 RIBC1Q8N443 379 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ANKS4BQ8N8V4 417 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 GIMAP7Q8NHV1 300 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 OPTNQ96CV9 577 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 TTC25Q96NG3 672 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 FDXACB1Q9BRP7 624 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 TMEM121Q9BTD3 319 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 FRMD8P1Q9BZ68 369 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 NSRP1Q9H0G5 558 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ASB7Q9H672 318 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ZWILCHQ9H900 591 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 CYP3A43Q9HB55 503 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 SAMD15Q9P1V8 674 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ALOX15BO15296 676 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 CSDE1O75534 798 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 OAS1P00973 400 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 LGALS2P05162 132 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 LAMC2Q13753 1193 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 HADHQ16836 314 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 MAP1SQ66K74 1059 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 ARMCX2Q7L311 632 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 MCRS1Q96EZ8 462 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 TMEM176AQ96HP8 235 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 SGSM3Q96HU1 749 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 METTL5Q9NRN9 209 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 TBK1Q9UHD2 729 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 SHOC2Q9UQ13 582 aa19.32■□□□□ 0.68
SEMA3B-209ENST00000456560 NDC80O14777 642 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 MICAL2O94851 1124 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 SLC10A6Q3KNW5 377 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 TAPT1Q6NXT6 567 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 MAMDC4Q6UXC1 1216 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 EMC1Q8N766 993 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 DYDC1Q8WWB3 177 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 TACO1Q9BSH4 297 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 TCP11X1B4DZS4 312 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 MAGEB2O15479 319 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms