RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TTC30AQ86WT1 665 aa25.04■■□□□ 1.6
PTPRA-208ENST00000455631 FAM184AQ8NB25 1140 aa25.04■■□□□ 1.6
PTPRA-208ENST00000455631 CCDC26Q8TAB7 109 aa25.04■■□□□ 1.6
PTPRA-208ENST00000455631 CDK5RAP3Q96JB5 506 aa25.04■■□□□ 1.6
PTPRA-208ENST00000455631 CNOT6LQ96LI5 555 aaKnown RBP25.04■■□□□ 1.6
PTPRA-208ENST00000455631 LLPHQ9BRT6 129 aaKnown RBP25.04■■□□□ 1.6
PTPRA-208ENST00000455631 TMLHEQ9NVH6 421 aa25.04■■□□□ 1.6
PTPRA-208ENST00000455631 LHX6Q9UPM6 363 aa25.04■■□□□ 1.6
PTPRA-208ENST00000455631 HYAL3O43820 417 aaPredicted RBP25.03■■□□□ 1.6
PTPRA-208ENST00000455631 CKMP06732 381 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 TSPY1Q01534 308 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 USP4Q13107 963 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 EML3Q32P44 896 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 C2orf27AQ580R0 203 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 RASSF3Q86WH2 238 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 MDGA1Q8NFP4 955 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 UXTQ9UBK9 157 aaPredicted RBP25.03■■□□□ 1.6
PTPRA-208ENST00000455631 C2CD2Q9Y426 696 aa25.03■■□□□ 1.6
PTPRA-208ENST00000455631 TRAV19A0A0A6YYK7 116 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 USP17L7P0C7H9 530 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 MAPK8P45983 427 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 ACOT2P49753 483 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 NR1H3Q13133 447 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 TRIM61Q5EBN2 209 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 SLC39A4Q6P5W5 647 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 LRSAM1Q6UWE0 723 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 USP33Q8TEY7 942 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 KCNN1Q92952 543 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 SLC22A12Q96S37 553 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 CYP2S1Q96SQ9 504 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 SLC32A1Q9H598 525 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 TMEM206Q9H813 350 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 DPP3Q9NY33 737 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 CIZ1Q9ULV3 898 aaPredicted RBP25.02■■□□□ 1.6
PTPRA-208ENST00000455631 NEUROG3Q9Y4Z2 214 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 WDFY3Q8IZQ1 3526 aa25.02■■□□□ 1.6
PTPRA-208ENST00000455631 ASCC3Q8N3C0 2202 aaKnown RBP25.02■■□□□ 1.6
PTPRA-208ENST00000455631 HMGN5P82970 282 aaKnown RBP25.01■■□□□ 1.59
PTPRA-208ENST00000455631 LMAN2Q12907 356 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 NFE2Q16621 373 aaPredicted RBP25.01■■□□□ 1.59
PTPRA-208ENST00000455631 DDR2Q16832 855 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 SV2CQ496J9 727 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 EFCAB13Q8IY85 973 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 MYCT1Q8N699 235 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 REEP2Q9BRK0 252 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 CCSER1Q9C0I3 900 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 ASB7Q9H672 318 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 EVLQ9UI08 416 aaPredicted RBP25.01■■□□□ 1.59
PTPRA-208ENST00000455631 ODF2LQ9ULJ1 636 aa25.01■■□□□ 1.59
PTPRA-208ENST00000455631 PTPRDP23468 1912 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 PKD1L2Q7Z442 2459 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 KPNA7A9QM74 516 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 ARSHQ5FYA8 562 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 ARMCX6Q7L4S7 300 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 CCDC33Q8N5R6 958 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 KCTD17Q8N5Z5 321 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 NUSAP1Q9BXS6 441 aaKnown RBP25■■□□□ 1.59
PTPRA-208ENST00000455631 EIF4ENIF1Q9NRA8 985 aaKnown RBP25■■□□□ 1.59
PTPRA-208ENST00000455631 KLK13Q9UKR3 277 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 LIMCH1Q9UPQ0 1083 aa25■■□□□ 1.59
PTPRA-208ENST00000455631 HELZP42694 1942 aaKnown RBP25■■□□□ 1.59
PTPRA-208ENST00000455631 NOL4O94818 638 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 FAM13AO94988 1023 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 SCP2P22307 547 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 RPL10AP62906 217 aaKnown RBP24.99■■□□□ 1.59
PTPRA-208ENST00000455631 ARL14EPQ8N8R7 260 aaPredicted RBP24.99■■□□□ 1.59
PTPRA-208ENST00000455631 SH3RF2Q8TEC5 729 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 TRMT2BQ96GJ1 504 aaKnown RBP24.99■■□□□ 1.59
PTPRA-208ENST00000455631 ZNF560Q96MR9 790 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 MMP17Q9ULZ9 603 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 TNRC6BQ9UPQ9 1833 aaKnown RBP24.99■■□□□ 1.59
PTPRA-208ENST00000455631 AKAP13Q12802 2813 aa24.99■■□□□ 1.59
PTPRA-208ENST00000455631 ANAPC1Q9H1A4 1944 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 SPAARA0A1B0GVQ0 90 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 ANTXRLA6NF34 631 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 K7EQS6 105 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 NFATC1O95644 943 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 CYP2F1P24903 491 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 KCNB1Q14721 858 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 CRY1Q16526 586 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 TMEM119Q4V9L6 283 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 ADALQ6DHV7 355 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 LPCAT2Q7L5N7 544 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 GPBP1Q86WP2 473 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 LEO1Q8WVC0 666 aaPredicted RBP24.98■■□□□ 1.59
PTPRA-208ENST00000455631 RLN3Q8WXF3 142 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 SPACA7Q96KW9 195 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 LINC00597Q9H2U6 94 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 ZHX3Q9H4I2 956 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 MSRB2Q9Y3D2 182 aa24.98■■□□□ 1.59
PTPRA-208ENST00000455631 VWA3AA6NCI4 1184 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 TRAK2O60296 914 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 ALDH1A2O94788 518 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 OPRD1P41143 372 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 DHX8Q14562 1220 aaKnown RBP24.97■■□□□ 1.59
PTPRA-208ENST00000455631 ZC2HC1CQ53FD0 456 aaPredicted RBP24.97■■□□□ 1.59
PTPRA-208ENST00000455631 MYRFLQ96LU7 910 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 PARVGQ9HBI0 331 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 ABCB6Q9NP58 842 aa24.97■■□□□ 1.59
PTPRA-208ENST00000455631 FASNP49327 2511 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms