RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 TLDC2A0PJX2 215 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 UBE2Q2LH0YL09 131 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 DSCR3O14972 297 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 SMAD6O43541 496 aaKnown RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 EIF5BO60841 1220 aaKnown RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 KRT10P13645 584 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 GCLCP48506 637 aaPredicted RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 TOB1P50616 345 aaPredicted RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 PDE1AP54750 535 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 ERVK-21P61565 698 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 TCF15Q12870 199 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 ZNF268Q14587 947 aaPredicted RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 ICE2Q659A1 982 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 KIRREL2Q6UWL6 708 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 ZNF813Q6ZN06 617 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 PARS2Q7L3T8 475 aaKnown RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 AMOTL1Q8IY63 956 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 COG1Q8WTW3 980 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 THOC3Q96J01 351 aaKnown RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 DMRTA2Q96SC8 542 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 GPR35Q9HC97 309 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 MAN1C1Q9NR34 630 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 SIDT1Q9NXL6 827 aaKnown RBP2.91□□□□□ -1.94
LINC02540-201ENST00000455554 WASHC2AQ641Q2 1341 aa2.91□□□□□ -1.94
LINC02540-201ENST00000455554 H3BNX3 289 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 GTPBP1O00178 669 aaKnown RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 F2RL2O00254 374 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 KIF20AO95235 890 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 CRYABP02511 175 aaKnown RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 FESP07332 822 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 NCLP19338 710 aaKnown RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 CYP2C19P33261 490 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 SOX5P35711 763 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 MASP1P48740 699 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 SLC16A1P53985 500 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 GHRHRQ02643 423 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 IL10RAQ13651 578 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 NPY5RQ15761 445 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 TAF7LQ5H9L4 462 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 MEX3CQ5U5Q3 659 aaKnown RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 SFRP4Q6FHJ7 346 aaPredicted RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 TMEM108Q6UXF1 575 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 POT1Q9NUX5 634 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 GNL3LQ9NVN8 582 aaKnown RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 TMA7Q9Y2S6 64 aaKnown RBP2.9□□□□□ -1.95
LINC02540-201ENST00000455554 SQORQ9Y6N5 450 aa2.9□□□□□ -1.95
LINC02540-201ENST00000455554 SBNO2Q9Y2G9 1366 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 EME2A4GXA9 379 aaPredicted RBP2.89□□□□□ -1.95
LINC02540-201ENST00000455554 EXOC3O60645 756 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 NDUFS2O75306 463 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 TJP3O95049 919 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 RARBP10826 455 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 MALP21145 153 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 HOXD9P28356 352 aaPredicted RBP2.89□□□□□ -1.95
LINC02540-201ENST00000455554 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 GPSM2P81274 684 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 TBC1D25Q3MII6 688 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 ZNF628Q5EBL2 1059 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 UBAP2Q5T6F2 1119 aaKnown RBP2.89□□□□□ -1.95
LINC02540-201ENST00000455554 PPP4R3AQ6IN85 833 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 SLC4A10Q6U841 1118 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 SERPINA13PQ6UXR4 307 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 C18orf65Q6ZTR6 163 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 Q6ZWC4 215 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 PPP1R32Q7Z5V6 425 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 ANKRD13AQ8IZ07 590 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 TERB1Q8NA31 727 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 ABHD11Q8NFV4 315 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 CAMK1GQ96NX5 476 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 SNX18Q96RF0 628 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 TRMOQ9BU70 441 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 GLOD4Q9HC38 313 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 MDFICQ9P1T7 246 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 TUBD1Q9UJT1 453 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 CCNL1Q9UK58 526 aaPredicted RBP2.89□□□□□ -1.95
LINC02540-201ENST00000455554 AGAP1Q9UPQ3 857 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 TBX22Q9Y458 520 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 IPPQ9Y573 584 aa2.89□□□□□ -1.95
LINC02540-201ENST00000455554 PRSS29PA6NIE9 313 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 TRIM75PA6NK02 468 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 NT5C1B-RDH14C9J2C7 533 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 GPR39O43194 453 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 HTRA2O43464 458 aaPredicted RBP2.88□□□□□ -1.95
LINC02540-201ENST00000455554 PDE8BO95263 885 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 TOMM40O96008 361 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 T-ENOLP0DO92 83 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 PSG1P11464 419 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 EDNRBP24530 442 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 TPTEP56180 551 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 SP2Q02086 613 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 SRSF1Q07955 248 aaKnown RBP eCLIP2.88□□□□□ -1.95
LINC02540-201ENST00000455554 SNAPC2Q13487 334 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 CLUL1Q15846 466 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 C3orf36Q3SXR2 165 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 EGFLAMQ63HQ2 1017 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 SDE2Q6IQ49 451 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 LVRNQ6Q4G3 990 aa2.88□□□□□ -1.95
LINC02540-201ENST00000455554 PIP4P1Q86T03 277 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms