RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ERBB2P04626 1255 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ALDH2P05091 517 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 CALB1P05937 261 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 GALTP07902 379 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 SETSIPP0DME0 302 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ACRP10323 421 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ODC1P11926 461 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 CCDC130P13994 396 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TYMPP19971 482 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ACAT1P24752 427 aaKnown RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 OR1G1P47890 313 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 SLC11A1P49279 550 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 PSMC1P62191 440 aaKnown RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 DEFB103AP81534 67 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 RNASELQ05823 741 aaKnown RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 PDE4CQ08493 712 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 PDCLQ13371 301 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 MAMLD1Q13495 774 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 MRPL58Q14197 206 aaKnown RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ZNF268Q14587 947 aaPredicted RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 LIN9Q5TKA1 542 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 C11orf63Q6NUN7 778 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 PMF1Q6P1K2 205 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 FAM171BQ6P995 826 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TMEM110Q86TL2 294 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 LRRTM3Q86VH5 581 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 XYLT1Q86Y38 959 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 CPNE8Q86YQ8 564 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ABI1Q8IZP0 508 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TMEM199Q8N511 208 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ANKRD52Q8NB46 1076 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 B3GALNT2Q8NCR0 500 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ZNF564Q8TBZ8 553 aaPredicted RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 STK32AQ8WU08 396 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 KHSRPQ92945 711 aaKnown RBP eCLIP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 C18orf8Q96DM3 657 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 HES6Q96HZ4 224 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 BTBD6Q96KE9 485 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TNIP3Q96KP6 325 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 FAM193BQ96PV7 902 aaPredicted RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ALS2CR12Q96Q35 445 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 HNRNPABQ99729 332 aaKnown RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 SYT15Q9BQS2 421 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ACBD6Q9BR61 282 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TMEM175Q9BSA9 504 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 SLC4A5Q9BY07 1137 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 B3GNT5Q9BYG0 378 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TRIM7Q9C029 511 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 CWH43Q9H720 699 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 RC3H2Q9HBD1 1191 aaKnown RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 IL23AQ9NPF7 189 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 CDC23Q9UJX2 597 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 CDH9Q9ULB4 789 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 SNX12Q9UMY4 172 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 PACSIN2Q9UNF0 486 aaPredicted RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 HYOU1Q9Y4L1 999 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ALG6Q9Y672 507 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 MYO7AQ13402 2215 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 COL4A4P53420 1690 aaPredicted RBP6.35□□□□□ -1.39
SDC4P-201ENST00000453285 OBSL1O75147 1896 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 CEP290O15078 2479 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 TMEM191CA6NGB0 347 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 SIGLEC16A6NMB1 481 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 CLDN5O00501 218 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 ZNF185O15231 689 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 DDX3YO15523 660 aaKnown RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 SRGAP2O75044 1071 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 BEST1O76090 585 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 UPP2O95045 317 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 OAZ2O95190 189 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 COMTP21964 271 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 FGFR3P22607 806 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 ADORA2BP29275 332 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 WDR5P61964 334 aaKnown RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 RPL7AP62424 266 aaKnown RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 PLCB3Q01970 1234 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 OGDHQ02218 1023 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 ZNF252P-AS1Q0IIN9 211 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 BST2Q10589 180 aaKnown RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 TUBB2AQ13885 445 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 MESDQ14696 234 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 MDH1BQ5I0G3 518 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 INTS6LQ5JSJ4 861 aaKnown RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 CYP4A22Q5TCH4 519 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 TMCO2Q7Z6W1 182 aaPredicted RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 DAAM2Q86T65 1068 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 TMEM173Q86WV6 379 aaPredicted RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 METTL23Q86XA0 190 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 CREG2Q8IUH2 290 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 RNF168Q8IYW5 571 aaPredicted RBP6.34□□□□□ -1.39
SDC4P-201ENST00000453285 SYCE1Q8N0S2 351 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 C3orf20Q8ND61 904 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 ZMIZ2Q8NF64 920 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 OR10T2Q8NGX3 314 aa6.34□□□□□ -1.39
SDC4P-201ENST00000453285 JOSD2Q8TAC2 188 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms