RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PYROXD1Q8WU10 500 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 CCDC106Q9BWC9 280 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 SSU72Q9NP77 194 aaKnown RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 MARCOQ9UEW3 520 aaPredicted RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 SOX13Q9UN79 622 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 SSX2IPQ9Y2D8 614 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 TM9SF1O15321 606 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 SLC16A3O15427 465 aaKnown RBP19.52■□□□□ 0.72
PTPA-223ENST00000452489 MARCH6O60337 910 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 KITP10721 976 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 PDK1Q15118 436 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 DCAF6Q58WW2 860 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 OGFRL1Q5TC84 451 aaPredicted RBP19.52■□□□□ 0.72
PTPA-223ENST00000452489 BBOF1Q8ND07 529 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 DYNLL2Q96FJ2 89 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 PIGSQ96S52 555 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 RUSC1Q9BVN2 902 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 ZNF395Q9H8N7 513 aaPredicted RBP19.52■□□□□ 0.72
PTPA-223ENST00000452489 MAD1L1Q9Y6D9 718 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 MYO3BQ8WXR4 1341 aa19.52■□□□□ 0.72
PTPA-223ENST00000452489 EIF3FO00303 357 aaPredicted RBP19.52■□□□□ 0.71
PTPA-223ENST00000452489 PEX1O43933 1283 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 ZSCAN5DPP0CG00 497 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 ADSSP30520 456 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 EIF2B2P49770 351 aaKnown RBP19.52■□□□□ 0.71
PTPA-223ENST00000452489 IGBP1P78318 339 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 PDAP1Q13442 181 aaKnown RBP19.52■□□□□ 0.71
PTPA-223ENST00000452489 PSMD6Q15008 389 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 TCHHL1Q5QJ38 904 aaPredicted RBP19.52■□□□□ 0.71
PTPA-223ENST00000452489 ITPRIPL1Q6GPH6 555 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 DCDC5Q6ZRR9 648 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 LPCAT2Q7L5N7 544 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 GSTA5Q7RTV2 222 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 DDI1Q8WTU0 396 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 TPK1Q9H3S4 243 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 PSTPIP2Q9H939 334 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 SLC24A2Q9UI40 661 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 SPO11Q9Y5K1 396 aa19.52■□□□□ 0.71
PTPA-223ENST00000452489 GPC6Q9Y625 555 aaPredicted RBP19.52■□□□□ 0.71
PTPA-223ENST00000452489 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
PTPA-223ENST00000452489 PDE8AO60658 829 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 MTA2O94776 668 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 TNNI2P48788 182 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 PDE1CQ14123 709 aaPredicted RBP19.51■□□□□ 0.71
PTPA-223ENST00000452489 C6orf52Q5T4I8 152 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 FASTKD5Q7L8L6 764 aaKnown RBP19.51■□□□□ 0.71
PTPA-223ENST00000452489 MYH11P35749 1972 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 A0A1B0GUL6 1792 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 ROBO3Q96MS0 1386 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 F5H6K3 240 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 K7EPI3 171 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 KLRC2P26717 231 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 CDK9P50750 372 aaKnown RBP19.51■□□□□ 0.71
PTPA-223ENST00000452489 SLC5A3P53794 718 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 POTEGQ6S5H5 508 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 C14orf80Q86SX3 495 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 ARID3BQ8IVW6 561 aaPredicted RBP19.51■□□□□ 0.71
PTPA-223ENST00000452489 BIRC8Q96P09 236 aa19.51■□□□□ 0.71
PTPA-223ENST00000452489 RBMX2Q9Y388 322 aaKnown RBP19.51■□□□□ 0.71
PTPA-223ENST00000452489 LPXNO60711 386 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 USP17L8P0C7I0 530 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 GYG1P46976 350 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 KPNA1P52294 538 aaPredicted RBP19.5■□□□□ 0.71
PTPA-223ENST00000452489 SLC12A3P55017 1021 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 ZNF804AQ7Z570 1209 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 CPNE9Q8IYJ1 553 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 RAB3IL1Q8TBN0 382 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 MZB1Q8WU39 189 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 REEP2Q9BRK0 252 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 C1orf21Q9H246 121 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 Q9H521 79 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 CYP4F11Q9HBI6 524 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 KCNK4Q9NYG8 393 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 EML1O00423 815 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 CCNT2O60583 730 aaKnown RBP19.5■□□□□ 0.71
PTPA-223ENST00000452489 FAM58BPP0C7Q3 252 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 GPX6P59796 221 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 SF3B3Q15393 1217 aaKnown RBP19.5■□□□□ 0.71
PTPA-223ENST00000452489 EFHC2Q5JST6 749 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 METTL21CQ5VZV1 264 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 OGFOD2Q6N063 350 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 NEPROQ6NW34 567 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 TTC13Q8NBP0 860 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 TMEM47Q9BQJ4 181 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 GPATCH1Q9BRR8 931 aaKnown RBP19.5■□□□□ 0.71
PTPA-223ENST00000452489 PLVAPQ9BX97 442 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 FHDC1Q9C0D6 1143 aaPredicted RBP19.5■□□□□ 0.71
PTPA-223ENST00000452489 PCDHA12Q9UN75 941 aa19.5■□□□□ 0.71
PTPA-223ENST00000452489 CACNA1SQ13698 1873 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 KRT38O76015 456 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 RALAP11233 206 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 ETS1P14921 441 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 ETV4P43268 484 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 TFDP1Q14186 410 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 OASLQ15646 514 aaKnown RBP19.49■□□□□ 0.71
PTPA-223ENST00000452489 USP17L2Q6R6M4 530 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 ETNPPLQ8TBG4 499 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 ZNF512Q96ME7 567 aaPredicted RBP19.49■□□□□ 0.71
PTPA-223ENST00000452489 DRC3Q9H069 523 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 TBC1D23Q9NUY8 699 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms