RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 AVPR1AP37288 418 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 GRIK1P39086 918 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 NCOA4Q13772 614 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 ANGPT1Q15389 498 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 ZNF667Q5HYK9 610 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 GUF1Q8N442 669 aaKnown RBP16.58■□□□□ 0.24
LIMS1-210ENST00000449684 MYLPFQ96A32 169 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 MRPL45Q9BRJ2 306 aaKnown RBP16.58■□□□□ 0.24
LIMS1-210ENST00000449684 TRAF3IP3Q9Y228 551 aa16.58■□□□□ 0.24
LIMS1-210ENST00000449684 SLC38A8A6NNN8 435 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 STAU1O95793 577 aaKnown RBP16.57■□□□□ 0.24
LIMS1-210ENST00000449684 DDX6P26196 483 aaKnown RBP eCLIP16.57■□□□□ 0.24
LIMS1-210ENST00000449684 PNOCQ13519 176 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 MDH1BQ5I0G3 518 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
LIMS1-210ENST00000449684 FAM171BQ6P995 826 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 LIMS2Q7Z4I7 341 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 STKLD1Q8NE28 680 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 PLEKHO2Q8TD55 490 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 TMEM174Q8WUU8 243 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 IL21Q9HBE4 155 aa16.57■□□□□ 0.24
LIMS1-210ENST00000449684 THG1LQ9NWX6 298 aaKnown RBP16.57■□□□□ 0.24
LIMS1-210ENST00000449684 HMGA1P17096 107 aaKnown RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 BDNFP23560 247 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 MAGEA11P43364 429 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 VAMP7P51809 220 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 KPNA1P52294 538 aaPredicted RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 NLRP12P59046 1061 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 DLG4P78352 724 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 ADAM9Q13443 819 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 CCDC142Q17RM4 750 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 ARHGAP29Q52LW3 1261 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 SCARA5Q6ZMJ2 495 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 INTS8Q75QN2 995 aaKnown RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 CELF5Q8N6W0 485 aaKnown RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 PHOX2BQ99453 314 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 OSBPL6Q9BZF3 934 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 IMPG2Q9BZV3 1241 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 GZF1Q9H116 711 aaPredicted RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 LTB4R2Q9NPC1 389 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 CRTAC1Q9NQ79 661 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 OBP2AQ9NY56 170 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 EHD2Q9NZN4 543 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 NDRG2Q9UN36 371 aaKnown RBP16.56■□□□□ 0.24
LIMS1-210ENST00000449684 PIAS3Q9Y6X2 628 aa16.56■□□□□ 0.24
LIMS1-210ENST00000449684 IKBKBO14920 756 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 TRIM66O15016 1216 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 CHADO15335 359 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 LRRN2O75325 713 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 NOL4O94818 638 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 F11P03951 625 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 C4BPAP04003 597 aaKnown RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 PTPN1P18031 435 aaKnown RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 TRIM21P19474 475 aaKnown RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 PSMC2P35998 433 aaKnown RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 PIK3CAP42336 1068 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 CLDN10P78369 228 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 CMTM8Q8IZV2 173 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 CCDC150Q8NCX0 1101 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 BPIFB1Q8TDL5 484 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 TRMT2BQ96GJ1 504 aaKnown RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 PCED1BQ96HM7 432 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 TSG101Q99816 390 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 DDX23Q9BUQ8 820 aaKnown RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 SLC46A2Q9BY10 475 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 XYLT2Q9H1B5 865 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 MMRN2Q9H8L6 949 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 TRPC7Q9HCX4 862 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 TRPV5Q9NQA5 729 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 SPATA6Q9NWH7 488 aaPredicted RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
LIMS1-210ENST00000449684 PIEZO1Q92508 2521 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 CACNA1HO95180 2353 aa16.55■□□□□ 0.24
LIMS1-210ENST00000449684 ATP8B3O60423 1300 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 MAPK13O15264 365 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 AKAP3O75969 853 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 GLULP15104 373 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 WEE1P30291 646 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 MAGEA9P43362 315 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 PLCB2Q00722 1185 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 FCHO2Q0JRZ9 810 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 NFIL3Q16649 462 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 ZACNQ401N2 412 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 TXNDC8Q6A555 127 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 SV2AQ7L0J3 742 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 C1orf210Q8IVY1 113 aa16.54■□□□□ 0.24
LIMS1-210ENST00000449684 SMYD4Q8IYR2 804 aaPredicted RBP16.54■□□□□ 0.24
LIMS1-210ENST00000449684 B3GALNT2Q8NCR0 500 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms