RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 IFRD2Q12894 506 aaPredicted RBP12.96□□□□□ -0.34
UBE3B-204ENST00000449510 CCDC14Q49A88 953 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 HABP4Q5JVS0 413 aaKnown RBP12.96□□□□□ -0.34
UBE3B-204ENST00000449510 C1orf186Q6ZWK4 172 aa12.96□□□□□ -0.34
UBE3B-204ENST00000449510 DHX35Q9H5Z1 703 aaKnown RBP12.96□□□□□ -0.34
UBE3B-204ENST00000449510 BTNL10A8MVZ5 291 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 TNNC2P02585 160 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 GSTA2P09210 222 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SHMT1P34896 483 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 NUDT2P50583 147 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 ESRRGP62508 458 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 NCOA4Q13772 614 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 ATP6V0A1Q93050 837 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SGF29Q96ES7 293 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 POLR3CQ9BUI4 534 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 KLC2Q9H0B6 622 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 POLR3FQ9H1D9 316 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 LRMDAQ9H2I8 198 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 PIK3C2AO00443 1686 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 DNALI1O14645 258 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 ATP9BO43861 1147 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SNRPAP09012 282 aaKnown RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 RPS6KA3P51812 740 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SLC12A1Q13621 1099 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SLC45A4Q5BKX6 768 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 CES3Q6UWW8 571 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SRPK1Q96SB4 655 aaKnown RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 DTNAQ9Y4J8 743 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 MON2Q7Z3U7 1717 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 RNF103-CHMP3A0A140T963 221 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 TBX3O15119 743 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 HOXD13P35453 343 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 SLC12A2P55011 1212 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 CRADDP78560 199 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 IL1RL1Q01638 556 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 CENPCQ03188 943 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 RINLQ6ZS11 566 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 IFNEQ86WN2 208 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 ZSCAN18Q8TBC5 510 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 ZBTB45Q96K62 511 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 C20orf96Q9NUD7 363 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 GALNT8Q9NY28 637 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 TAS2R1Q9NYW7 299 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 FNDC3AQ9Y2H6 1198 aaKnown RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 MRPL42Q9Y6G3 142 aaKnown RBP12.95□□□□□ -0.34
UBE3B-204ENST00000449510 V9GYQ6 96 aa12.95□□□□□ -0.34
UBE3B-204ENST00000449510 DCXO43602 365 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 NPTX2P47972 431 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 COPAP53621 1224 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 GAD2Q05329 585 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 PRPSAP1Q14558 356 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 CLEC16AQ2KHT3 1053 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 RYBPQ8N488 228 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-204ENST00000449510 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 INPP5DQ92835 1189 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 IL1RL2Q9HB29 575 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 TBX20Q9UMR3 447 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 AURKCQ9UQB9 309 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 PRR5-ARHGAP8B1AHC4 643 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 M0QYV0 167 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 GIPC1O14908 333 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 C6orf222P0C671 652 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-204ENST00000449510 SREBF1P36956 1147 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 PKNOX1P55347 436 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 ARHGAP8P85298 464 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 POU5F1BQ06416 359 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 PTK6Q13882 451 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 DNAL1Q4LDG9 190 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 TLDC1Q6P9B6 456 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 ASAP3Q8TDY4 903 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 CCT7Q99832 543 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-204ENST00000449510 GOLGA4Q13439 2230 aaKnown RBP12.94□□□□□ -0.34
UBE3B-204ENST00000449510 BST1Q10588 318 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 NRF1Q16656 503 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 RBM15BQ8NDT2 890 aaKnown RBP12.94□□□□□ -0.34
UBE3B-204ENST00000449510 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
UBE3B-204ENST00000449510 RAG1P15918 1043 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 SMARCA1P28370 1054 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 RHBDL3P58872 404 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 CDK16Q00536 496 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 CC2D2BQ6DHV5 1058 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 MFSD5Q6N075 450 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 SPOCD1Q6ZMY3 1216 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 TMPRSS6Q8IU80 811 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 WDR18Q9BV38 432 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 MRPL1Q9BYD6 325 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms