RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KIF22Q14807 665 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 NBPF12Q5TAG4 269 aaPredicted RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 RASSF3Q86WH2 238 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 REPS2Q8NFH8 660 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 HNRNPABQ99729 332 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 STRA6Q9BX79 667 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CDC42EP4Q9H3Q1 356 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 MAP3K20Q9NYL2 800 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 UBIAD1Q9Y5Z9 338 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 KANSL1LA0AUZ9 987 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 ALDH2P05091 517 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CCR3P51677 355 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 STAT4Q14765 748 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 PDCD4Q53EL6 469 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLC2A7Q6PXP3 512 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 NUP93Q8N1F7 819 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 PHF12Q96QT6 1004 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 RIT2Q99578 217 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CCPG1Q9ULG6 757 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 GSTT2P0CG29 244 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 GSTT2BP0CG30 244 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 COILP38432 576 aaPredicted RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 WDR4P57081 412 aaKnown RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZNF211Q13398 564 aaPredicted RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 MESDQ14696 234 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 CTC1Q2NKJ3 1217 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 SAMD3Q8N6K7 520 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 ADAMTS5Q9UNA0 930 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 FAF1Q9UNN5 650 aaPredicted RBP14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 TSC22D4Q9Y3Q8 395 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 PTPRFP10586 1907 aa14.11□□□□□ -0.15
SYNGAP1-204ENST00000449372 DDX3YO15523 660 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 SERPINB7O75635 380 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 CYP2J2P51589 502 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 PATL1Q86TB9 770 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 SNF8Q96H20 258 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 EIF2AQ9BY44 585 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 ACTL7BQ9Y614 415 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 MAGEB2O15479 319 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 FTLP02792 175 aaPredicted RBP14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 CLCN2P51788 898 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 FYB2Q5VWT5 728 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 PCNX4Q63HM2 1172 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 CCDC89Q8N998 374 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLC30A5Q8TAD4 765 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 ARL8BQ9NVJ2 186 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 TGFB1I1O43294 461 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 STRNO43815 780 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 CDH16O75309 829 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 LDHAP00338 332 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 GRM2Q14416 872 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 ODR4Q5SWX8 454 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 WNK4Q96J92 1243 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 ACCSQ96QU6 501 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZNF577Q9BSK1 485 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 NENFQ9UMX5 172 aa14.1□□□□□ -0.15
SYNGAP1-204ENST00000449372 FAM47DPA6NHR8 397 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 EDF1O60869 148 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 PTGIRP43119 386 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 AP2B1P63010 937 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 PPIDQ08752 370 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 TBC1D10BQ4KMP7 808 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 HSP90AA5PQ58FG0 334 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 DCAF12L1Q5VU92 463 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLC13A5Q86YT5 568 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLC9A9Q8IVB4 645 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 TTC25Q96NG3 672 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 TUT1Q9H6E5 874 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 DNAJC17Q9NVM6 304 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 FADS3Q9Y5Q0 445 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 E9PBE3 544 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 COL6A2P12110 1019 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 CTNNA2P26232 953 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 KCNA1Q09470 495 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 ASPHQ12797 758 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 BFSP1Q12934 665 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 KYNUQ16719 465 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 BBS5Q8N3I7 341 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 NSL1Q96IY1 281 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 CFAP57Q96MR6 1250 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 PRICKLE1Q96MT3 831 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 KCNH7Q9NS40 1196 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 C2CD2LO14523 706 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 HAUS5O94927 633 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 PGM1P36871 562 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLC1A1P43005 524 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 MTMR2Q13614 643 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 LIN9Q5TKA1 542 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 RNF207Q6ZRF8 634 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 TPH2Q8IWU9 490 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 EXOC8Q8IYI6 725 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 ARHGAP24Q8N264 748 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 OTOFQ9HC10 1997 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms