RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DDX3XO00571 662 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 BUB1O43683 1085 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 GPR32O75388 356 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 PPP1R37O75864 691 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 GNA14O95837 355 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC9A1P19634 815 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 PSMC2P35998 433 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 PNPLA4P41247 253 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF131P52739 623 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 UBE3AQ05086 875 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 MBTD1Q05BQ5 628 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 TARBP2Q15633 366 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 TJAP1Q5JTD0 557 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 TPCN2Q8NHX9 752 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 IGSF21Q96ID5 467 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 NOX5Q96PH1 765 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 SPAG5Q96R06 1193 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ATXN3LQ9H3M9 355 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLGA2P5Q9HBQ8 144 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 C5orf60A6NFR6 353 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 KIAA0391O15091 583 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 UCHL3P15374 230 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 MTHFRP42898 656 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 PSEN1P49768 467 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 TFF2Q03403 129 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 KCNH2Q12809 1159 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF394Q53GI3 561 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 FAM26DQ5JW98 314 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 C1orf186Q6ZWK4 172 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 NT5DC3Q86UY8 548 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF280BQ86YH2 543 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZDHHC14Q8IZN3 488 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 B3GALT6Q96L58 329 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 UROC1Q96N76 676 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ACO2Q99798 780 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 LSM14BQ9BX40 385 aaKnown RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADAMTS10Q9H324 1103 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZDHHC18Q9NUE0 388 aa7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 PACSIN2Q9UNF0 486 aaPredicted RBP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDC42BPA-208ENST00000442054 PCNTO95613 3336 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 A0A1B0GUA9 196 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLGA6CA6NDK9 693 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 MGEA5O60502 916 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 ITGB1P05556 798 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CKMP06732 381 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLGA6DP0CG33 693 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 AVPR1AP37288 418 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 GUCY2FP51841 1108 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 HADHBP55084 474 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 KCNA1Q09470 495 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 HIC1Q14526 733 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SPA17Q15506 151 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 KNOP1Q1ED39 458 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SFMBT2Q5VUG0 894 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 PRSS55Q6UWB4 352 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 LRIG3Q6UXM1 1119 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 FAM43BQ6ZT52 329 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 OTOP3Q7RTS5 596 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 DNAAF5Q86Y56 855 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 EFCAB13Q8IY85 973 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 C10orf67Q8IYJ2 551 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 PPM1KQ8N3J5 372 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SH2D3CQ8N5H7 860 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 HVCN1Q96D96 273 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CALR3Q96L12 384 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLGA6AQ9NYA3 693 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 HSPBP1Q9NZL4 362 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CWC15Q9P013 229 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 DNAJB4Q9UDY4 337 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 INTUQ9ULD6 942 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 NFU1Q9UMS0 254 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SMIM28A0A1B0GU29 152 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 LACTBL1A8MY62 500 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 H3BNC9 293 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 PDXKO00764 312 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 FTCDO95954 541 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 C8AP07357 584 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 POLR2FP61218 127 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 NFE2Q16621 373 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SPRED3Q2MJR0 410 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 C10orf76Q5T2E6 689 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CNPY4Q8N129 248 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 TDRD5Q8NAT2 981 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 FAM76AQ8TAV0 307 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 BSNDQ8WZ55 320 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CAPS2Q9BXY5 557 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 IKZF4Q9H2S9 585 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADAM7Q9H2U9 754 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 LRRC4Q9HBW1 653 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 OLFML3Q9NRN5 406 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 DSEQ9UL01 958 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 NR2E1Q9Y466 385 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC16A3O15427 465 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CCL16O15467 120 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 FSBPO95073 299 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 GRM5P41594 1212 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 MXI1P50539 228 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 POU5F1BQ06416 359 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms