RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SDHAF4Q5VUM1 108 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 TANGO2Q6ICL3 276 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 MYCBPAPQ8TBZ2 947 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 TAS1R2Q8TE23 839 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 ASB16Q96NS5 453 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 PRRX2Q99811 253 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 IL21Q9HBE4 155 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.24■■□□□ 1.634e-6■■■■■ 32.5
VARS-217ENST00000440048 KIAA1468Q9P260 1216 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 WDFY4Q6ZS81 3184 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 ECI2O75521 394 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 CFHP08603 1231 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 HMGA1P17096 107 aaKnown RBP25.23■■□□□ 1.63
VARS-217ENST00000440048 PTPN1P18031 435 aaKnown RBP25.23■■□□□ 1.63
VARS-217ENST00000440048 FCARP24071 287 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 MAGEA11P43364 429 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 CYP27A1Q02318 531 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 STKLD1Q8NE28 680 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 NELFBQ8WX92 580 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 PCED1BQ96HM7 432 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 DUSP9Q99956 384 aaKnown RBP25.23■■□□□ 1.63
VARS-217ENST00000440048 GPR88Q9GZN0 384 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 ATXN3LQ9H3M9 355 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 FBXL21Q9UKT6 434 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 DENND4CQ5VZ89 1909 aa25.23■■□□□ 1.63
VARS-217ENST00000440048 BDNFP23560 247 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 KRT39Q6A163 491 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 TTI2Q6NXR4 508 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 SCN4BQ8IWT1 228 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 SMARCD2Q92925 531 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 ELSPBP1Q96BH3 223 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 IPO9Q96P70 1041 aaKnown RBP25.22■■□□□ 1.63
VARS-217ENST00000440048 PLA2G2FQ9BZM2 168 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 SLITRK6Q9H5Y7 841 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 APOBEC3GQ9HC16 384 aaKnown RBP25.22■■□□□ 1.63
VARS-217ENST00000440048 SLC2A4RGQ9NR83 387 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 CTNND2Q9UQB3 1225 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 GREB1Q4ZG55 1949 aa25.22■■□□□ 1.63
VARS-217ENST00000440048 CACNA1HO95180 2353 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 STX10O60499 249 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 LRRN2O75325 713 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 CSH1P0DML2 217 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 CSH2P0DML3 217 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 ASPAP45381 313 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 MXI1P50539 228 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 GPC5P78333 572 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 STXBP5Q5T5C0 1151 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 TRIML1Q8N9V2 468 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 B3GALNT2Q8NCR0 500 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 ZSCAN18Q8TBC5 510 aaPredicted RBP25.21■■□□□ 1.63
VARS-217ENST00000440048 CEP63Q96MT8 703 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 IMPG2Q9BZV3 1241 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 ZFP14Q9HCL3 533 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 WNT16Q9UBV4 365 aa25.21■■□□□ 1.63
VARS-217ENST00000440048 ARMCX3Q9UH62 379 aaPredicted RBP25.21■■□□□ 1.63
VARS-217ENST00000440048 OBSL1O75147 1896 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 SLC38A8A6NNN8 435 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 CDC25CP30307 473 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 NOP14P78316 857 aaKnown RBP25.2■■□□□ 1.62
VARS-217ENST00000440048 DCAF17Q5H9S7 520 aaPredicted RBP25.2■■□□□ 1.62
VARS-217ENST00000440048 GPR158Q5T848 1215 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 TCERG1LQ5VWI1 586 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 FOXR2Q6PJQ5 311 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 VSTM1Q6UX27 236 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 SEMA4DQ92854 862 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 BCO2Q9BYV7 579 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 TRPV4Q9HBA0 871 aa25.2■■□□□ 1.62
VARS-217ENST00000440048 MAGED2Q9UNF1 606 aaPredicted RBP25.2■■□□□ 1.62
VARS-217ENST00000440048 BICDL2A1A5D9 508 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 NOL4O94818 638 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 STX17P56962 302 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 CYP4F8P98187 520 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 ARHGAP15Q53QZ3 475 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 FILIP1Q7Z7B0 1213 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 TMEM150AQ86TG1 271 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 SIX5Q8N196 739 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 GCNAQ96QF7 691 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 B3GNT5Q9BYG0 378 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 CLSTN2Q9H4D0 955 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 LMBRD1Q9NUN5 540 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 CA14Q9ULX7 337 aa25.19■■□□□ 1.62
VARS-217ENST00000440048 KMT2EQ8IZD2 1858 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 NUP210Q8TEM1 1887 aaPredicted RBP25.18■■□□□ 1.62
VARS-217ENST00000440048 KRBA1A5PL33 1030 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 F11P03951 625 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 GRIK1P39086 918 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 VIPR2P41587 438 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 NLRP12P59046 1061 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 PAK1Q13153 545 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 CBWD6Q4V339 395 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 CBWD3Q5JTY5 395 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 CBWD5Q5RIA9 395 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 CCDC150Q8NCX0 1101 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 FBXL13Q8NEE6 735 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 TNIP3Q96KP6 325 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 SPATA17Q96L03 361 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 NIF3L1Q9GZT8 377 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 MFSD1Q9H3U5 465 aa25.18■■□□□ 1.62
VARS-217ENST00000440048 METTL14Q9HCE5 456 aaKnown RBP25.18■■□□□ 1.62
VARS-217ENST00000440048 RAB20Q9NX57 234 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms