RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 DDR2Q16832 855 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 CFAP221Q4G0U5 840 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 GET4Q7L5D6 327 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 SCN4BQ8IWT1 228 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 GJD3Q8N144 294 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 ITFG1Q8TB96 612 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 GPR152Q8TDT2 470 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 WHAMMQ8TF30 809 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 FUBP3Q96I24 572 aaKnown RBP eCLIP20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 TNIP3Q96KP6 325 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 TUBGCP2Q9BSJ2 902 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 CRACR2AQ9BSW2 395 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 FUCA2Q9BTY2 467 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 B3GNT5Q9BYG0 378 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 ELOVL4Q9GZR5 314 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 INTS2Q9H0H0 1204 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 CISHQ9NSE2 258 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 NR2E1Q9Y466 385 aa20.74■□□□□ 0.91
SEMA3B-206ENST00000439487 ANAPC1Q9H1A4 1944 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 CLDN5O00501 218 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 PRKCSHP14314 528 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 GBP2P32456 591 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 MYL5Q02045 173 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 NFKBIBQ15653 356 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 SLC5A9Q2M3M2 681 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 TCP11X2Q5H9J9 407 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 CDKAL1Q5VV42 579 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 OTOP3Q7RTS5 596 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 DNAJB7Q7Z6W7 309 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 CRYBG2Q8N1P7 616 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 TDRD5Q8NAT2 981 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 STKLD1Q8NE28 680 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 MYADMQ96S97 322 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 ASB3Q9Y575 518 aa20.73■□□□□ 0.91
SEMA3B-206ENST00000439487 MYL4P12829 197 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 EEF1GP26641 437 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 MAGEA11P43364 429 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 RPL10AP62906 217 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 VEPH1Q14D04 833 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 VWA3BQ502W6 1294 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 ZNF394Q53GI3 561 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 MIIPQ5JXC2 388 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 PDZD4Q76G19 769 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 ARHGEF19Q8IW93 802 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 AOPEPQ8N6M6 819 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 C12orf29Q8N999 325 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 KAT5Q92993 513 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 PSMG2Q969U7 264 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 ACSF2Q96CM8 615 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 TCEAL4Q96EI5 215 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 MED10Q9BTT4 135 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 NT5C1AQ9BXI3 368 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 LRRC3Q9BY71 257 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 ZNF518BQ9C0D4 1074 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 AVENQ9NQS1 362 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 ASAH2Q9NR71 780 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 GCNT4Q9P109 453 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 USTQ9Y2C2 406 aa20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 MRPS23Q9Y3D9 190 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-206ENST00000439487 NRG2O14511 850 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 SLC9A1P19634 815 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 TBXAS1P24557 533 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 GRIK1P39086 918 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 CCR2P41597 374 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 NCAPHQ15003 741 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 PRSS36Q5K4E3 855 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 CYP4A22Q5TCH4 519 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 GBP6Q6ZN66 633 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 PAQR9Q6ZVX9 377 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 RRAGAQ7L523 313 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 ITIH5Q86UX2 942 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 TMC8Q8IU68 726 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 PPM1KQ8N3J5 372 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 TTC39CQ8N584 583 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 ING5Q8WYH8 240 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 NAT10Q9H0A0 1025 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 NDST4Q9H3R1 872 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 ZNF334Q9HCZ1 680 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 FAM49BQ9NUQ9 324 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 TAB2Q9NYJ8 693 aa20.71■□□□□ 0.91
SEMA3B-206ENST00000439487 PES1O00541 588 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 CCDC130P13994 396 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 GJA1P17302 382 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 CACNA2D1P54289 1103 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 EPHA5P54756 1037 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 MTMR3Q13615 1198 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 TAF12Q16514 161 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 ZSCAN23Q3MJ62 389 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 VSTM1Q6UX27 236 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 FAM35AQ86V20 835 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 UBR7Q8N806 425 aa20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.7■□□□□ 0.9
SEMA3B-206ENST00000439487 PATJQ8NI35 1801 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 SLC38A8A6NNN8 435 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 ZNF197O14709 1029 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 MOSPD3O75425 235 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 CEBPBP17676 345 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 TRIM21P19474 475 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 RAD23BP54727 409 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 YWHAEP62258 255 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms