RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CSH2P0DML3 217 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 AVPR1AP37288 418 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 PXNP49023 591 aaPredicted RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 NASPP49321 788 aaPredicted RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 PSMC1P62191 440 aaKnown RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 MYL7Q01449 175 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 ALCAMQ13740 583 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 RUNX3Q13761 415 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 SIM2Q14190 667 aaPredicted RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 NFE2Q16621 373 aaPredicted RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 SOWAHAQ2M3V2 549 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 LAIR1Q6GTX8 287 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 LINC00301Q8NCQ3 95 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 CACTINQ8WUQ7 758 aaKnown RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 KBTBD7Q8WVZ9 684 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 FBRSL1Q9HCM7 1045 aaKnown RBP19.5■□□□□ 0.71
GTF3A-204ENST00000438571 TDP1Q9NUW8 608 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 GDAP2Q9NXN4 497 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 RAB23Q9ULC3 237 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 NME7Q9Y5B8 376 aa19.5■□□□□ 0.71
GTF3A-204ENST00000438571 GABRDO14764 452 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 STX6O43752 255 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 STK38Q15208 465 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 MON1AQ86VX9 555 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 LONP2Q86WA8 852 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 CCDC65Q8IXS2 484 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 TMEM86AQ8N2M4 240 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 TOP6BLQ8N6T0 577 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 TTC16Q8NEE8 873 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 MRPS31Q92665 395 aaKnown RBP19.49■□□□□ 0.71
GTF3A-204ENST00000438571 INTS4Q96HW7 963 aaKnown RBP19.49■□□□□ 0.71
GTF3A-204ENST00000438571 TMEM206Q9H813 350 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 TRPC7Q9HCX4 862 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 INTS13Q9NVM9 706 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 THADAQ6YHU6 1953 aa19.49■□□□□ 0.71
GTF3A-204ENST00000438571 MYO18AQ92614 2054 aaKnown RBP19.48■□□□□ 0.71
GTF3A-204ENST00000438571 EGFP01133 1207 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 LMO2P25791 158 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 DDX6P26196 483 aaKnown RBP eCLIP19.48■□□□□ 0.71
GTF3A-204ENST00000438571 CASP1P29466 404 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 RBP5P82980 135 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 LMNB2Q03252 620 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 TMEM196Q5HYL7 178 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 SCN4BQ8IWT1 228 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 GPR161Q8N6U8 529 aaKnown RBP19.48■□□□□ 0.71
GTF3A-204ENST00000438571 MYLPFQ96A32 169 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 CYP2S1Q96SQ9 504 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 ABCB6Q9NP58 842 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 CRTAC1Q9NQ79 661 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 THG1LQ9NWX6 298 aaKnown RBP19.48■□□□□ 0.71
GTF3A-204ENST00000438571 HSPBP1Q9NZL4 362 aa19.48■□□□□ 0.71
GTF3A-204ENST00000438571 TFIP11Q9UBB9 837 aaKnown RBP19.48■□□□□ 0.71
GTF3A-204ENST00000438571 CDV3Q9UKY7 258 aaKnown RBP19.48■□□□□ 0.71
GTF3A-204ENST00000438571 DCDC2BA2VCK2 349 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 USP4Q13107 963 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 MTF1Q14872 753 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 ZNF77Q15935 545 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 FOXD4L5Q5VV16 416 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 LIMS2Q7Z4I7 341 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 WDR5BQ86VZ2 330 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 SPATA2LQ8IUW3 424 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 ABCA7Q8IZY2 2146 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 FOXD4L4Q8WXT5 416 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 EZH1Q92800 747 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 DHX58Q96C10 678 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 TRMT2BQ96GJ1 504 aaKnown RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 ANKRD36BP1Q96IX9 119 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 SYT15Q9BQS2 421 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 TNMDQ9H2S6 317 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 ZSCAN16Q9H4T2 348 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-204ENST00000438571 KIF9Q9HAQ2 790 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 KBTBD4Q9NVX7 518 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 WNT6Q9Y6F9 365 aa19.47■□□□□ 0.71
GTF3A-204ENST00000438571 C2orf78A6NCI8 922 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 K7ELQ4 463 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-204ENST00000438571 SPTLC2O15270 562 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 RNF40O75150 1001 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 RETP07949 1114 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 RPL10AP62906 217 aaKnown RBP19.46■□□□□ 0.71
GTF3A-204ENST00000438571 CFAP221Q4G0U5 840 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 FAM171BQ6P995 826 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 SHC4Q6S5L8 630 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 EPM2AIP1Q7L775 607 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-204ENST00000438571 FAM160A2Q8N612 972 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-204ENST00000438571 ARL14EPQ8N8R7 260 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-204ENST00000438571 HPDLQ96IR7 371 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 MYRFLQ96LU7 910 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 SEMA4GQ9NTN9 838 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 ZMYM5Q9UJ78 669 aa19.46■□□□□ 0.71
GTF3A-204ENST00000438571 CEP192Q8TEP8 1941 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 ANTXRLA6NF34 631 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 PRR5-ARHGAP8B1AHC4 643 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 TRDMT1O14717 391 aaKnown RBP19.45■□□□□ 0.7
GTF3A-204ENST00000438571 CLIC2O15247 247 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 TGFB1I1O43294 461 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 GDF9O60383 454 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 GJA4P35212 333 aa19.45■□□□□ 0.7
GTF3A-204ENST00000438571 LHX1P48742 406 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms