RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 PHLDB3Q6NSJ2 640 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 RTL10Q7L3V2 364 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
SNRPB-202ENST00000438552 UBR7Q8N806 425 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 STKLD1Q8NE28 680 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 KREMEN1Q96MU8 473 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 NT5C1AQ9BXI3 368 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 B3GNT5Q9BYG0 378 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 TSPY26PQ9H489 355 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 ABCB6Q9NP58 842 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 FAM49BQ9NUQ9 324 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 CEP72Q9P209 647 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 HSFX1Q9UBD0 423 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 CLUHO75153 1309 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 POU2F2P09086 479 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 CCDC130P13994 396 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 BDNFP23560 247 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 ALDH1A3P47895 512 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
SNRPB-202ENST00000438552 GCNT1Q02742 428 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 GRASPQ7Z6J2 395 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-202ENST00000438552 FAM35AQ86V20 835 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 C12orf29Q8N999 325 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 GPR152Q8TDT2 470 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 FUBP3Q96I24 572 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRPB-202ENST00000438552 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 APEX2Q9UBZ4 518 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 AJAP1Q9UKB5 411 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-202ENST00000438552 FAM50BQ9Y247 325 aa17.19■□□□□ 0.34
SNRPB-202ENST00000438552 MYO16Q9Y6X6 1858 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 CAVIN2O95810 425 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 BMP1P13497 986 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 ACO1P21399 889 aaKnown RBP17.18■□□□□ 0.34
SNRPB-202ENST00000438552 SP100P23497 879 aaPredicted RBP17.18■□□□□ 0.34
SNRPB-202ENST00000438552 TUFMP49411 452 aaKnown RBP17.18■□□□□ 0.34
SNRPB-202ENST00000438552 CACNA2D1P54289 1103 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 RAD23BP54727 409 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 EPHB3P54753 998 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 KCNMA1Q12791 1236 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 PLD1Q13393 1074 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 DDR2Q16832 855 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 ATAT1Q5SQI0 421 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 SDHAF4Q5VUM1 108 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 CYP26C1Q6V0L0 522 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 ELMOD1Q8N336 334 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 SLC4A11Q8NBS3 891 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 GIPC2Q8TF65 315 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 CORO1BQ9BR76 489 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 LSM14BQ9BX40 385 aaKnown RBP17.18■□□□□ 0.34
SNRPB-202ENST00000438552 UBE2TQ9NPD8 197 aaPredicted RBP17.18■□□□□ 0.34
SNRPB-202ENST00000438552 TMEM30AQ9NV96 361 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 DNMT3BQ9UBC3 853 aaKnown RBP17.18■□□□□ 0.34
SNRPB-202ENST00000438552 PCDHB4Q9Y5E5 795 aa17.18■□□□□ 0.34
SNRPB-202ENST00000438552 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
SNRPB-202ENST00000438552 ADORA2BP29275 332 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 MAGEA11P43364 429 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 KLK7P49862 253 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 PABPC1LQ4VXU2 614 aaKnown RBP17.17■□□□□ 0.34
SNRPB-202ENST00000438552 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 FKBP15Q5T1M5 1219 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 TMEM270Q6UE05 265 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 PAQR9Q6ZVX9 377 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 HS6ST3Q8IZP7 471 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 FUKQ8N0W3 1084 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 SLC2A14Q8TDB8 520 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 TMEM176AQ96HP8 235 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 FAM124BQ9H5Z6 455 aaPredicted RBP17.17■□□□□ 0.34
SNRPB-202ENST00000438552 WDR6Q9NNW5 1121 aaKnown RBP17.17■□□□□ 0.34
SNRPB-202ENST00000438552 KRT82Q9NSB4 513 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 DOCK8Q8NF50 2099 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 ATP8B3O60423 1300 aa17.17■□□□□ 0.34
SNRPB-202ENST00000438552 DENND4CQ5VZ89 1909 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 RHOP08100 348 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 TRIM21P19474 475 aaKnown RBP17.16■□□□□ 0.34
SNRPB-202ENST00000438552 MFAP3P55082 362 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 ZNF445P59923 1031 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 TPM4P67936 248 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 VEPH1Q14D04 833 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 ARHGAP44Q17R89 818 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 SLC5A9Q2M3M2 681 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 DPY19L2P1Q6NXN4 242 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 VSTM1Q6UX27 236 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 GET4Q7L5D6 327 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-202ENST00000438552 RBBP8NLQ8NC74 664 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-202ENST00000438552 PSMG2Q969U7 264 aa17.16■□□□□ 0.34
SNRPB-202ENST00000438552 ZNF512Q96ME7 567 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-202ENST00000438552 HEXIM2Q96MH2 286 aaKnown RBP17.16■□□□□ 0.34
SNRPB-202ENST00000438552 ZNF334Q9HCZ1 680 aaPredicted RBP17.16■□□□□ 0.34
SNRPB-202ENST00000438552 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms