RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 SIGLEC16A6NMB1 481 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 C19orf81C9J6K1 198 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 C2CD2LO14523 706 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 TRAFD1O14545 582 aaPredicted RBP20.27■□□□□ 0.84
FAM239A-202ENST00000438107 TM9SF1O15321 606 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 HNRNPCL1O60812 293 aaKnown RBP20.27■□□□□ 0.84
FAM239A-202ENST00000438107 DIAPH2O60879 1101 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 TOM1L1O75674 476 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 YWHAEP62258 255 aaKnown RBP20.27■□□□□ 0.84
FAM239A-202ENST00000438107 OTUD4Q01804 1114 aaKnown RBP20.27■□□□□ 0.84
FAM239A-202ENST00000438107 HADHQ16836 314 aaKnown RBP20.27■□□□□ 0.84
FAM239A-202ENST00000438107 CAPN12Q6ZSI9 719 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 DNERQ8NFT8 737 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 ACTL9Q8TC94 416 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 ZNF112Q9UJU3 913 aa20.27■□□□□ 0.84
FAM239A-202ENST00000438107 RPL26L1Q9UNX3 145 aaKnown RBP20.27■□□□□ 0.84
FAM239A-202ENST00000438107 HARSP12081 509 aaKnown RBP20.27■□□□□ 0.83
FAM239A-202ENST00000438107 KRT4P19013 534 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 PSMA2P25787 234 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 TNFSF9P41273 254 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 DUOXA2Q1HG44 320 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 SEZ6Q53EL9 994 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 FYB2Q5VWT5 728 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 SCARA3Q6AZY7 606 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 OTOAQ7RTW8 1153 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 ANKMY2Q8IV38 441 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 ACSF2Q96CM8 615 aaPredicted RBP20.27■□□□□ 0.83
FAM239A-202ENST00000438107 MRPL4Q9BYD3 311 aaKnown RBP20.27■□□□□ 0.83
FAM239A-202ENST00000438107 MTMR12Q9C0I1 747 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 LHX5Q9H2C1 402 aa20.27■□□□□ 0.83
FAM239A-202ENST00000438107 PTPRAP18433 802 aa20.26■□□□□ 0.83
FAM239A-202ENST00000438107 TARSP26639 723 aaKnown RBP20.26■□□□□ 0.83
FAM239A-202ENST00000438107 SLC16A10Q8TF71 515 aa20.26■□□□□ 0.83
FAM239A-202ENST00000438107 SAR1AQ9NR31 198 aa20.26■□□□□ 0.83
FAM239A-202ENST00000438107 HAO1Q9UJM8 370 aa20.26■□□□□ 0.83
FAM239A-202ENST00000438107 PPME1Q9Y570 386 aa20.26■□□□□ 0.83
FAM239A-202ENST00000438107 E7ENQ6 273 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 OGTO15294 1046 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 T-ENOLP0DO92 83 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 TRPC3Q13507 836 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 TFDP1Q14186 410 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 SH3TC2Q8TF17 1288 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 MZB1Q8WU39 189 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 JDP2Q8WYK2 163 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 SLC7A6OSQ96CW6 309 aaPredicted RBP20.25■□□□□ 0.83
FAM239A-202ENST00000438107 PAFAH2Q99487 392 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 SLC5A4Q9NY91 659 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 UTRNP46939 3433 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 CST8O60676 142 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 MSCO60682 206 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 MAFO75444 373 aaPredicted RBP20.25■□□□□ 0.83
FAM239A-202ENST00000438107 TROVE2P10155 538 aaKnown RBP eCLIP20.25■□□□□ 0.83
FAM239A-202ENST00000438107 KRT3P12035 628 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 KDELR1P24390 212 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
FAM239A-202ENST00000438107 FNBP1LQ5T0N5 605 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 CYP4A22Q5TCH4 519 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 CATSPERGQ6ZRH7 1159 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 C3orf62Q6ZUJ4 267 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 CCDC125Q86Z20 511 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 RSAD2Q8WXG1 361 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 ZNF570Q96NI8 536 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 VPS11Q9H270 941 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 PICK1Q9NRD5 415 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 WDR35Q9P2L0 1181 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 LNPEPQ9UIQ6 1025 aa20.25■□□□□ 0.83
FAM239A-202ENST00000438107 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 GOLGA8MH3BSY2 632 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 MED7O43513 233 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 LRCH4O75427 683 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 SSTR1P30872 391 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 RFC1P35251 1148 aaPredicted RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 RPL22P35268 128 aaKnown RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 HMGCS2P54868 508 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 RNASELQ05823 741 aaKnown RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 SEPT7Q16181 437 aaKnown RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ZNF394Q53GI3 561 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ANKRD22Q5VYY1 191 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 NLRP9Q7RTR0 991 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 RHPN2Q8IUC4 686 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ACO2Q99798 780 aaKnown RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 CPSF3Q9UKF6 684 aaKnown RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ANK1P16157 1881 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 BANF1O75531 89 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 GDF10P55107 478 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 NAA25Q14CX7 972 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ZNF699Q32M78 642 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 PTPN20Q4JDL3 420 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 WASHC2DQ5SRD0 308 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 NBPF12Q5TAG4 269 aaPredicted RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 CDCA2Q69YH5 1023 aaPredicted RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ZNF276Q8N554 614 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 ARFGAP1Q8N6T3 406 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 BANPQ8N9N5 519 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 DCAKDQ8WVC6 231 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 MRRFQ96E11 262 aaKnown RBP20.24■□□□□ 0.83
FAM239A-202ENST00000438107 PCYT2Q99447 389 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 TLE6Q9H808 572 aa20.24■□□□□ 0.83
FAM239A-202ENST00000438107 RNPEPL1Q9HAU8 725 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms