RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CALCAP01258 141 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 AMHP03971 560 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SERPING1P05155 500 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 FERP16591 822 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 EIF4A3P38919 411 aaKnown RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 USP8P40818 1118 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 PNPLA4P41247 253 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 PLA2G4AP47712 749 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 RAP1GAPP47736 663 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 AARSP49588 968 aaKnown RBP eCLIP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 TAF6P49848 677 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF132P52740 706 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 PPIGQ13427 754 aaKnown RBP eCLIP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SOWAHAQ2M3V2 549 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ASTE1Q2TB18 679 aaPredicted RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 C4orf17Q53FE4 359 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM240Q5SV17 173 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 DCLRE1AQ6PJP8 1040 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP26C1Q6V0L0 522 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SCARA5Q6ZMJ2 495 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 OTOP2Q7RTS6 562 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC47A2Q86VL8 602 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 TMTC1Q8IUR5 882 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ABI1Q8IZP0 508 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CCDC112Q8NEF3 446 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 URGCPQ8TCY9 931 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 WHAMMQ8TF30 809 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 DPF3Q92784 378 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF689Q96CS4 500 aaPredicted RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 TRIM44Q96DX7 344 aaPredicted RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF560Q96MR9 790 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 UROC1Q96N76 676 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 MRPL45Q9BRJ2 306 aaKnown RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SYT11Q9BT88 431 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 HAUS4Q9H6D7 363 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SMYD3Q9H7B4 428 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 NRDE2Q9H7Z3 1164 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 NHEJ1Q9H9Q4 299 aaPredicted RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP3A43Q9HB55 503 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ACP6Q9NPH0 428 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CISHQ9NSE2 258 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNHIT6Q9NWK9 470 aaKnown RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 DNAJB4Q9UDY4 337 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 ZMYND8Q9ULU4 1186 aaPredicted RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 R3HCC1Q9Y3T6 440 aaKnown RBP7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 PCDHB4Q9Y5E5 795 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 SNX9Q9Y5X1 595 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 CENPFP49454 3210 aa7.51□□□□□ -1.21
LSM3P3-201ENST00000436601 TBKBP1A7MCY6 615 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 J3QL48 77 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 EIF1AYO14602 144 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 ARHGAP6O43182 974 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 B3GAT3O94766 335 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 CLSTN1O94985 981 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 ITGB1P05556 798 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 KRT5P13647 590 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 P4HA1P13674 534 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP11B1P15538 503 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 CHRNB2P17787 502 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 CD58P19256 250 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 RAD23BP54727 409 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 TNNC1P63316 161 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 RNASELQ05823 741 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 KLHL30Q0D2K2 578 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 INCA1Q0VD86 236 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 SV2CQ496J9 727 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 PAN2Q504Q3 1202 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 TIGD5Q53EQ6 642 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM270Q6UE05 265 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF571Q7Z3V5 609 aaPredicted RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 NOP9Q86U38 636 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 RBBP8NLQ8NC74 664 aaPredicted RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC30A5Q8TAD4 765 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC20A1Q8WUM9 679 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 KBTBD7Q8WVZ9 684 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 UBXN4Q92575 508 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 CRELD1Q96HD1 420 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 TWNKQ96RR1 684 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 MMS19Q96T76 1030 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 ZSWIM1Q9BR11 485 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 ELOVL4Q9GZR5 314 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 RC3H2Q9HBD1 1191 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 HMGXB4Q9UGU5 601 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 NOCTQ9UK39 431 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 L1RE1Q9UN81 338 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 NME7Q9Y5B8 376 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 BZW2Q9Y6E2 419 aaKnown RBP7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 AK5Q9Y6K8 562 aa7.5□□□□□ -1.21
LSM3P3-201ENST00000436601 A0A087X0T9 212 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM189-UBE2V1I3L0A0 370 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 I3L4J1 428 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 DDX3XO00571 662 aaKnown RBP eCLIP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 CYB561D2O14569 222 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 GABRDO14764 452 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 NRP1O14786 923 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms