RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 PNPOQ9NVS9 261 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 CALCOCO1Q9P1Z2 691 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 CPA4Q9UI42 421 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 PADI4Q9UM07 663 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 PCDHA6Q9UN73 950 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 POLHQ9Y253 713 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC00353-201ENST00000435401 ZNF804BA4D1E1 1349 aa4.87□□□□□ -1.63
LINC00353-201ENST00000435401 ARHGEF17Q96PE2 2063 aaPredicted RBP4.87□□□□□ -1.63
LINC00353-201ENST00000435401 CAPN8A6NHC0 703 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 FAM227AF5H4B4 570 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 PMM2O15305 246 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 URI1O94763 535 aaPredicted RBP4.86□□□□□ -1.63
LINC00353-201ENST00000435401 AHSGP02765 367 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 CD1AP06126 327 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 RHBDL3P58872 404 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 MC2RQ01718 297 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 EIF2B5Q13144 721 aaKnown RBP4.86□□□□□ -1.63
LINC00353-201ENST00000435401 SEMA5AQ13591 1074 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 UBE4AQ14139 1066 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 SAFBQ15424 915 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC00353-201ENST00000435401 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 SRGAP1Q7Z6B7 1085 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 VGLL2Q8N8G2 317 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 TMIEQ8NEW7 156 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 PARD3BQ8TEW8 1205 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 TRIB1Q96RU8 372 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 ALG8Q9BVK2 526 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 NAA15Q9BXJ9 866 aaKnown RBP4.86□□□□□ -1.63
LINC00353-201ENST00000435401 SPATA31A3Q5VYP0 1347 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 ADGRA2Q96PE1 1338 aa4.86□□□□□ -1.63
LINC00353-201ENST00000435401 A0A0B4J269 797 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 CFAP69A5D8W1 941 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 PRSS29PA6NIE9 313 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 LINC01548A6NM66 108 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 VWC2LB2RUY7 222 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 TRIAP1O43715 76 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 HRGP04196 525 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 KITP10721 976 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 SLC5A1P13866 664 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 SMARCA1P28370 1054 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 PRDX5P30044 214 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 TFF2Q03403 129 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 TUBB3Q13509 450 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 MTX3Q5HYI7 312 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 PLAC9Q5JTB6 97 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 TAPT1Q6NXT6 567 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 APOA5Q6Q788 366 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 MAEAQ7L5Y9 396 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 FAM9AQ8IZU1 332 aaPredicted RBP4.85□□□□□ -1.63
LINC00353-201ENST00000435401 POC1BQ8TC44 478 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 TTC17Q96AE7 1141 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 C22orf23Q9BZE7 217 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 SEMA4CQ9C0C4 833 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 SLAMF7Q9NQ25 335 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 SLC45A2Q9UMX9 530 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 USP19O94966 1318 aa4.85□□□□□ -1.63
LINC00353-201ENST00000435401 F5H697 171 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 PQBP1O60828 265 aaKnown RBP4.84□□□□□ -1.63
LINC00353-201ENST00000435401 HDCP19113 662 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 PEX2P28328 305 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 CCT8P50990 548 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 FGL2Q14314 439 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 C11orf87Q6NUJ2 197 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 DARS2Q6PI48 645 aaKnown RBP4.84□□□□□ -1.63
LINC00353-201ENST00000435401 FAM90A1Q86YD7 464 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 PMM1Q92871 262 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
LINC00353-201ENST00000435401 RFKQ969G6 155 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 OSBPL9Q96SU4 736 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 AMBRA1Q9C0C7 1298 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 MRPL46Q9H2W6 279 aaKnown RBP4.84□□□□□ -1.63
LINC00353-201ENST00000435401 EHD3Q9NZN3 535 aa4.84□□□□□ -1.63
LINC00353-201ENST00000435401 POLRMTO00411 1230 aaKnown RBP4.83□□□□□ -1.64
LINC00353-201ENST00000435401 IKBKBO14920 756 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 PLIN1O60240 522 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 NBPF7P0C2Y1 421 aaPredicted RBP4.83□□□□□ -1.64
LINC00353-201ENST00000435401 PRR35P0CG20 571 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 NR2F6P10588 404 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 NPR1P16066 1061 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 PTGER1P34995 402 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 FAM193AP78312 1265 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 EXOSC9Q06265 439 aaKnown RBP4.83□□□□□ -1.64
LINC00353-201ENST00000435401 SKAP1Q86WV1 359 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 PDSS2Q86YH6 399 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 IL31RAQ8NI17 732 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 LRTOMTQ8WZ04 291 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 MPHOSPH6Q99547 160 aaKnown RBP4.83□□□□□ -1.64
LINC00353-201ENST00000435401 P2RX7Q99572 595 aaKnown RBP4.83□□□□□ -1.64
LINC00353-201ENST00000435401 SERTAD4Q9NUC0 356 aa4.83□□□□□ -1.64
LINC00353-201ENST00000435401 FEZ2Q9UHY8 353 aaPredicted RBP4.83□□□□□ -1.64
LINC00353-201ENST00000435401 ANO9A1A5B4 782 aa4.82□□□□□ -1.64
LINC00353-201ENST00000435401 TARM1B6A8C7 271 aa4.82□□□□□ -1.64
LINC00353-201ENST00000435401 E9PLN8 166 aa4.82□□□□□ -1.64
LINC00353-201ENST00000435401 GOLIM4O00461 696 aa4.82□□□□□ -1.64
LINC00353-201ENST00000435401 SOAT2O75908 522 aa4.82□□□□□ -1.64
LINC00353-201ENST00000435401 ARIH2O95376 493 aa4.82□□□□□ -1.64
LINC00353-201ENST00000435401 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00353-201ENST00000435401 PHKG2P15735 406 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms