RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 CNNM4Q6P4Q7 775 aa23.95■■□□□ 1.42
HMG20B-205ENST00000435022 C1orf228Q6PIY5 440 aa23.95■■□□□ 1.42
HMG20B-205ENST00000435022 FOXD4L4Q8WXT5 416 aaPredicted RBP23.95■■□□□ 1.42
HMG20B-205ENST00000435022 SNX21Q969T3 373 aa23.95■■□□□ 1.42
HMG20B-205ENST00000435022 SLC22A12Q96S37 553 aa23.95■■□□□ 1.42
HMG20B-205ENST00000435022 GZF1Q9H116 711 aaPredicted RBP23.95■■□□□ 1.42
HMG20B-205ENST00000435022 CHURC1-FNTBB4DL54 471 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 YEATS4O95619 227 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 LMO2P25791 158 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 FNTBP49356 437 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 MYL7Q01449 175 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 ITPRIPL2Q3MIP1 535 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 CFAP221Q4G0U5 840 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 NAIF1Q69YI7 327 aaPredicted RBP23.94■■□□□ 1.42
HMG20B-205ENST00000435022 FAM171BQ6P995 826 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 MON1AQ86VX9 555 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 SPATA18Q8TC71 538 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 ZNF507Q8TCN5 953 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 TRMT2BQ96GJ1 504 aaKnown RBP23.94■■□□□ 1.42
HMG20B-205ENST00000435022 MYRFLQ96LU7 910 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 CRTAC1Q9NQ79 661 aa23.94■■□□□ 1.42
HMG20B-205ENST00000435022 KIAA0391O15091 583 aaKnown RBP23.93■■□□□ 1.42
HMG20B-205ENST00000435022 EIF3DO15371 548 aaKnown RBP eCLIP23.93■■□□□ 1.42
HMG20B-205ENST00000435022 HRO43593 1189 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 ARSAP15289 507 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 PSMC1P62191 440 aaKnown RBP23.93■■□□□ 1.42
HMG20B-205ENST00000435022 ASIC1P78348 528 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 RSPO4Q2I0M5 234 aaPredicted RBP23.93■■□□□ 1.42
HMG20B-205ENST00000435022 DGKKQ5KSL6 1271 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 HPDLQ96IR7 371 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 EBF3Q9H4W6 596 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 AGPAT3Q9NRZ7 376 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 TDP1Q9NUW8 608 aa23.93■■□□□ 1.42
HMG20B-205ENST00000435022 ZNF233A6NK53 670 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 CUTAO60888 179 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 DDX6P26196 483 aaKnown RBP eCLIP23.92■■□□□ 1.42
HMG20B-205ENST00000435022 AVPR1AP37288 418 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 NRLP54845 237 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 FAM26FQ5R3K3 315 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 FSTL4Q6MZW2 842 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 HSCBQ8IWL3 235 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 SCFD1Q8WVM8 642 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 ANKRD36BP1Q96IX9 119 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 C7orf25Q9BPX7 421 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 CUEDC2Q9H467 287 aa23.92■■□□□ 1.42
HMG20B-205ENST00000435022 FBRSL1Q9HCM7 1045 aaKnown RBP23.92■■□□□ 1.42
HMG20B-205ENST00000435022 HELZP42694 1942 aaKnown RBP23.92■■□□□ 1.42
HMG20B-205ENST00000435022 CST3P01034 146 aaPredicted RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 LHX1P48742 406 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 RPL10AP62906 217 aaKnown RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 RUNX3Q13761 415 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 PKP1Q13835 747 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 PUM1Q14671 1186 aaKnown RBP eCLIP23.91■■□□□ 1.427e-8■□□□□ 9.3
HMG20B-205ENST00000435022 FOXD4L6Q3SYB3 417 aaPredicted RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 TMEM196Q5HYL7 178 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 FOXD4L3Q6VB84 417 aaPredicted RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 WDR49Q8IV35 697 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 MRPS31Q92665 395 aaKnown RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 MYLPFQ96A32 169 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 FUBP3Q96I24 572 aaKnown RBP eCLIP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 ZNF396Q96N95 335 aaPredicted RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 CYP2S1Q96SQ9 504 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 SYT15Q9BQS2 421 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 BLZF1Q9H2G9 400 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 THG1LQ9NWX6 298 aaKnown RBP23.91■■□□□ 1.42
HMG20B-205ENST00000435022 ZMYM5Q9UJ78 669 aa23.91■■□□□ 1.42
HMG20B-205ENST00000435022 KIAA1549LQ6ZVL6 1849 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 PCSK1P29120 753 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 USP4Q13107 963 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 ZNF268Q14587 947 aaPredicted RBP23.9■■□□□ 1.42
HMG20B-205ENST00000435022 PPP2R5DQ14738 602 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 ZNF77Q15935 545 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 HEATR6Q6AI08 1181 aaKnown RBP23.9■■□□□ 1.42
HMG20B-205ENST00000435022 DPH6Q7L8W6 267 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 TRAPPC11Q7Z392 1133 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 DGLUCYQ7Z3D6 616 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 SPATA2LQ8IUW3 424 aaPredicted RBP23.9■■□□□ 1.42
HMG20B-205ENST00000435022 SCN4BQ8IWT1 228 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 NELFCDQ8IXH7 590 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 RDH13Q8NBN7 331 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 KIF9Q9HAQ2 790 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 GCNT4Q9P109 453 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 MYO16Q9Y6X6 1858 aa23.9■■□□□ 1.42
HMG20B-205ENST00000435022 C2orf78A6NCI8 922 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 SOBPA7XYQ1 873 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 CLIC2O15247 247 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 TNNC2P02585 160 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 WARSP23381 471 aaKnown RBP23.89■■□□□ 1.41
HMG20B-205ENST00000435022 MAGEA11P43364 429 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 USP46P62068 366 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 SNRNP35Q16560 246 aaKnown RBP23.89■■□□□ 1.41
HMG20B-205ENST00000435022 DUOXA2Q1HG44 320 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 STXBP4Q6ZWJ1 553 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 UNC13DQ70J99 1090 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 IQUBQ8NA54 791 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 PLEKHO2Q8TD55 490 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 ZNF516Q92618 1163 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 EZH1Q92800 747 aaPredicted RBP23.89■■□□□ 1.41
HMG20B-205ENST00000435022 CGRRF1Q99675 332 aa23.89■■□□□ 1.41
HMG20B-205ENST00000435022 MRPL45Q9BRJ2 306 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms