RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 NOMO3P69849 1222 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 MRPS25P82663 173 aaKnown RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CALCOCO2Q13137 446 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 KLF1Q13351 362 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 IRF5Q13568 498 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CUL2Q13617 745 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 PLCB4Q15147 1175 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TRADDQ15628 312 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CCNG2Q16589 344 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TBC1D10BQ4KMP7 808 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 ANGEL2Q5VTE6 544 aaKnown RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TDRD10Q5VZ19 366 aaKnown RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 DENND2CQ68D51 928 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 RHBDF2Q6PJF5 856 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 METTL7BQ6UX53 244 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CRELD2Q6UXH1 353 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 PLPPR4Q7Z2D5 763 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 RHOT1Q8IXI2 618 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 NIPA2Q8N8Q9 360 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 ZSWIM2Q8NEG5 633 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 EXD1Q8NHP7 514 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 MYCBPAPQ8TBZ2 947 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 UBLCP1Q8WVY7 318 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 PPM1EQ8WY54 764 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 SEPT1Q8WYJ6 367 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CCDC127Q96BQ5 260 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 WNK4Q96J92 1243 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 FAM213AQ9BRX8 229 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 TRIM51Q9BSJ1 452 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 NFKBIZQ9BYH8 718 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 FRMD8P1Q9BZ68 369 aaPredicted RBP7.89□□□□□ -1.15
COL17A1-204ENST00000433822 CCDC113Q9H0I3 377 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 RASSF4Q9H2L5 321 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 EPB41L4BQ9H329 900 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 PPCSQ9HAB8 311 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 ERVK-5Q9HDB9 667 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 ANAPC7Q9UJX3 599 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 NR2E1Q9Y466 385 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 USP3Q9Y6I4 520 aa7.89□□□□□ -1.15
COL17A1-204ENST00000433822 MROH7Q68CQ1 1323 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ZSWIM8A7E2V4 1837 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 GSTTP1A0A1W2PQM5 241 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 GMNCA6NCL1 334 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 OGTO15294 1046 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ASAP2O43150 1006 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 FAM189A1O60320 539 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 SORBS3O60504 671 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 VNN1O95497 513 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ASS1P00966 412 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 CALB1P05937 261 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 RARAP10276 462 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 DLATP10515 647 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 TNNI1P19237 187 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 MMP8P22894 467 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 USP8P40818 1118 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 MMP13P45452 471 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 RPL21P46778 160 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 NOP14P78316 857 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 PDCLQ13371 301 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 KYAT1Q16773 422 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 KRT71Q3SY84 523 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 MTERF2Q49AM1 385 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 NAA35Q5VZE5 725 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 DDX42Q86XP3 938 aaKnown RBP eCLIP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 DNAAF5Q86Y56 855 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ZDHHC14Q8IZN3 488 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 MICALL1Q8N3F8 863 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 RIBC1Q8N443 379 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 SH2D3CQ8N5H7 860 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ATL2Q8NHH9 583 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 FBXO25Q8TCJ0 367 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 GTF3C2Q8WUA4 911 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 ZKSCAN4Q969J2 545 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 C18orf8Q96DM3 657 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 RBM41Q96IZ5 413 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 SERPINB12Q96P63 405 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 KIFC3Q9BVG8 833 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 MRPL4Q9BYD3 311 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 CELF4Q9BZC1 486 aaKnown RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 DPH5Q9H2P9 285 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 NEUROD4Q9HD90 331 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 TOPORSQ9NS56 1045 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 RBAKQ9NYW8 714 aaPredicted RBP7.88□□□□□ -1.15
COL17A1-204ENST00000433822 IP6K2Q9UHH9 426 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 RSPH14Q9UHP6 348 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 SNCAIPQ9Y6H5 919 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 OTOFQ9HC10 1997 aa7.88□□□□□ -1.15
COL17A1-204ENST00000433822 UMODL1Q5DID0 1318 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 DNAJC25-GNG10A0A024R161 153 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 A0A0G2JLL6 359 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 TCRBV5S1A1TA0A578 114 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 UNCXA6NJT0 531 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 MEFVO15553 781 aaPredicted RBP7.87□□□□□ -1.15
COL17A1-204ENST00000433822 RIPK2O43353 540 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 B4GALT4O60513 344 aa7.87□□□□□ -1.15
COL17A1-204ENST00000433822 MSCO60682 206 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms