RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 MYLK2Q9H1R3 596 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 CPSF3Q9UKF6 684 aaKnown RBP13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 STRIP2Q9ULQ0 834 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 AGTPBP1Q9UPW5 1226 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 EFR3BQ9Y2G0 817 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 STK38LQ9Y2H1 464 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 NFKBIEO00221 500 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 ABLIM1O14639 778 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 HOXC6P09630 235 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 IL1R2P27930 398 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 RXRBP28702 533 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 ELF1P32519 619 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 TFAMQ00059 246 aaKnown RBP13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 ZNF699Q32M78 642 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 ANKRD22Q5VYY1 191 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 CDCA2Q69YH5 1023 aaPredicted RBP13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 TLDC1Q6P9B6 456 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 PCGF5Q86SE9 256 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 CHST13Q8NET6 341 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 MAK16Q9BXY0 300 aaKnown RBP13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 ADAM33Q9BZ11 813 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 XYLT2Q9H1B5 865 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 C10orf88Q9H8K7 445 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 ZWILCHQ9H900 591 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
SNRNP200-202ENST00000429650 EDF1O60869 148 aaKnown RBP13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 LRCH4O75427 683 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 FAM160B1Q5W0V3 765 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 PPIL6Q8IXY8 311 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 JOSD2Q8TAC2 188 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 CPT1BQ92523 772 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 RABGEF1Q9UJ41 708 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 CHKBQ9Y259 395 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 USH1CQ9Y6N9 552 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 CEP350Q5VT06 3117 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 MGAMO43451 1857 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 SIGLEC16A6NMB1 481 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 CST8O60676 142 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 ITGBL1O95965 494 aaPredicted RBP13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 PRKCBP05771 671 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 SRGAP2CP0DJJ0 459 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 KRT3P12035 628 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 GEMIN4P57678 1058 aaKnown RBP13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 EFTUD2Q15029 972 aaKnown RBP eCLIP13.98□□□□□ -0.176e-7■■■■■ 32.1
SNRNP200-202ENST00000429650 SURF1Q15526 300 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 MSS51Q4VC12 460 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 KCNT1Q5JUK3 1230 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 BBS12Q6ZW61 710 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 KIAA0319LQ8IZA0 1049 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 LRRC8CQ8TDW0 803 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 ERP27Q96DN0 273 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 PHACTR1Q9C0D0 580 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 ETNK1Q9HBU6 452 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 TXLNGQ9NUQ3 528 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 CYTH4Q9UIA0 394 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 DNAH12Q6ZR08 3092 aa13.98□□□□□ -0.17
SNRNP200-202ENST00000429650 ANK1P16157 1881 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 SSTR1P30872 391 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 TCF7P36402 384 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 LACTBP83111 547 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 LAMTOR4Q0VGL1 99 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 TFDP1Q14186 410 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 SETDB1Q15047 1291 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 TAZQ16635 292 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 FNBP1LQ5T0N5 605 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 IER5Q5VY09 327 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 NAT8LQ8N9F0 302 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 KLRG1Q96E93 195 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 WDR83Q9BRX9 315 aaKnown RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 FRMD8P1Q9BZ68 369 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 FETUBQ9UGM5 382 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 ANP32DO95626 131 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 KRT7P08729 469 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 KRT4P19013 534 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 KDELR1P24390 212 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 ARL4CP56559 192 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 MYO1EQ12965 1108 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 MAPK6Q16659 721 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 DALRD3Q5D0E6 543 aaKnown RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 HHATQ5VTY9 493 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 ATP11CQ8NB49 1132 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 PYROXD1Q8WU10 500 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 LHX5Q9H2C1 402 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 SSU72Q9NP77 194 aaKnown RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 ZMYND8Q9ULU4 1186 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 POLIQ9UNA4 740 aa13.97□□□□□ -0.17
SNRNP200-202ENST00000429650 CD48P09326 243 aa13.96□□□□□ -0.17
SNRNP200-202ENST00000429650 FGFR1P11362 822 aa13.96□□□□□ -0.17
SNRNP200-202ENST00000429650 CD19P15391 556 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms