RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SLC35G2Q8TBE7 412 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 SLC2A14Q8TDB8 520 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 CTNNBL1Q8WYA6 563 aaPredicted RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 RFFLQ8WZ73 363 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PIWIL1Q96J94 861 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 CPXM1Q96SM3 734 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PKMYT1Q99640 499 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 NUP85Q9BW27 656 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 MRPL9Q9BYD2 267 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 FAM124BQ9H5Z6 455 aaPredicted RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 ADAM22Q9P0K1 906 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 CNOT8Q9UFF9 292 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 GTF3C4Q9UKN8 822 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 ADAM28Q9UKQ2 775 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
SMC6-204ENST00000428868 PACSIN2Q9UNF0 486 aaPredicted RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 MRPL42Q9Y6G3 142 aaKnown RBP9.41□□□□□ -0.9
SMC6-204ENST00000428868 A0A0A6YYK5 440 aaPredicted RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 TMEM110-MUSTN1A8MSY1 372 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 MED7O43513 233 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 TADA2AO75478 443 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 BAIAP3O94812 1187 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 LSM8O95777 96 aaKnown RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 LINC00271P0C7V0 271 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 TYMPP19971 482 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 MMP8P22894 467 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 NOP2P46087 812 aaKnown RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 PDE4CQ08493 712 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 PDCLQ13371 301 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 PPIGQ13427 754 aaKnown RBP eCLIP9.4□□□□□ -0.93e-6■□□□□ 9.8
SMC6-204ENST00000428868 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 DNTTIP2Q5QJE6 756 aaKnown RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 DAB2IPQ5VWQ8 1189 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 OVOS1Q6IE37 1185 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 PMF1Q6P1K2 205 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 FUT10Q6P4F1 479 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 RSPO2Q6UXX9 243 aaPredicted RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 TMEM35BQ8NCS4 154 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 MYLPFQ96A32 169 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 TMEM175Q9BSA9 504 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 ZNF518BQ9C0D4 1074 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 LHX5Q9H2C1 402 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 LUC7LQ9NQ29 371 aaKnown RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 FAN1Q9Y2M0 1017 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.9
SMC6-204ENST00000428868 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.4□□□□□ -0.9
SMC6-204ENST00000428868 LCHNA4D1U4 455 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 E5RJQ4 531 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 GOLGA8SH3BPF8 625 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 MTA2O94776 668 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 EFEMP2O95967 443 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 FGBP02675 491 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 CASQ1P31415 396 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 LHX1P48742 406 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 RPL7AP62424 266 aaKnown RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 AMPD2Q01433 879 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 OGDHQ02218 1023 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 ZNF252P-AS1Q0IIN9 211 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 RTP2Q5QGT7 225 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 FAM171A1Q5VUB5 890 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 PLEKHA7Q6IQ23 1121 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 PRSS55Q6UWB4 352 aaPredicted RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 FAM183BPQ6ZVS7 135 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 SPRED2Q7Z698 418 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 FAM35AQ86V20 835 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 ERICH1Q86X53 443 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 XYLT1Q86Y38 959 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 LRRN4CLQ8ND94 238 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 ZMIZ2Q8NF64 920 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 JOSD2Q8TAC2 188 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 ZNF564Q8TBZ8 553 aaPredicted RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 CLEC4CQ8WTT0 213 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 SLC35F5Q8WV83 523 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 PCED1BQ96HM7 432 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 NOX5Q96PH1 765 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 HNRNPABQ99729 332 aaKnown RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 SMOQ99835 787 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 CHD7Q9P2D1 2997 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 CDH9Q9ULB4 789 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 KIAA1257Q9ULG3 409 aa9.39□□□□□ -0.91
SMC6-204ENST00000428868 HELZP42694 1942 aaKnown RBP9.39□□□□□ -0.91
SMC6-204ENST00000428868 CHD9Q3L8U1 2897 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ADAM12O43184 909 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 SRGAP2O75044 1071 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ARHGEF15O94989 841 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 VNN2O95498 520 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ALDH2P05091 517 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 FAM163BP0C2L3 166 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 FGFR3P22607 806 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 GABRB2P47870 512 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms