RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ZNF507Q8TCN5 953 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 MSANTD3Q96H12 275 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
SEC13-210ENST00000428626 CRTAC1Q9NQ79 661 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 DLL3Q9NYJ7 618 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 PTPRDP23468 1912 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 MED19A0JLT2 244 aaPredicted RBP16.65■□□□□ 0.26
SEC13-210ENST00000428626 ZNF233A6NK53 670 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CHURC1-FNTBB4DL54 471 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 HRO43593 1189 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CUTAO60888 179 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 YEATS4O95619 227 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CSH1P0DML2 217 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CSH2P0DML3 217 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 ARSAP15289 507 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 FNTBP49356 437 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 PSMC1P62191 440 aaKnown RBP16.65■□□□□ 0.26
SEC13-210ENST00000428626 ASIC1P78348 528 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 PLCB2Q00722 1185 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 MYL7Q01449 175 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 PKP1Q13835 747 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 ITPRIPL2Q3MIP1 535 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 MON1AQ86VX9 555 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 HPDLQ96IR7 371 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 MYRFLQ96LU7 910 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CYP2S1Q96SQ9 504 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 C7orf25Q9BPX7 421 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 BLZF1Q9H2G9 400 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 EBF3Q9H4W6 596 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 FBRSL1Q9HCM7 1045 aaKnown RBP16.65■□□□□ 0.26
SEC13-210ENST00000428626 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
SEC13-210ENST00000428626 CLIC2O15247 247 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 EIF3DO15371 548 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEC13-210ENST00000428626 PAPSS2O95340 614 aaPredicted RBP16.64■□□□□ 0.25
SEC13-210ENST00000428626 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
SEC13-210ENST00000428626 AVPR1AP37288 418 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 LRRC32Q14392 662 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 RSPO4Q2I0M5 234 aaPredicted RBP16.64■□□□□ 0.25
SEC13-210ENST00000428626 CFAP221Q4G0U5 840 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 DGKKQ5KSL6 1271 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 FAM26FQ5R3K3 315 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 FSTL4Q6MZW2 842 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 C1orf228Q6PIY5 440 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 NELFCDQ8IXH7 590 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 RDH13Q8NBN7 331 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 SNX21Q969T3 373 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 TRMT2BQ96GJ1 504 aaKnown RBP16.64■□□□□ 0.25
SEC13-210ENST00000428626 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
SEC13-210ENST00000428626 CUEDC2Q9H467 287 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 TDP1Q9NUW8 608 aa16.64■□□□□ 0.25
SEC13-210ENST00000428626 POLR3BQ9NW08 1133 aaPredicted RBP16.64■□□□□ 0.25
SEC13-210ENST00000428626 KIAA0391O15091 583 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 DDX6P26196 483 aaKnown RBP eCLIP16.63■□□□□ 0.25
SEC13-210ENST00000428626 LHX1P48742 406 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 NRLP54845 237 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 RUNX3Q13761 415 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 DUOXA2Q1HG44 320 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 HEATR6Q6AI08 1181 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 TRAPPC11Q7Z392 1133 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 WDR49Q8IV35 697 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 SCN4BQ8IWT1 228 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 IQUBQ8NA54 791 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 ZNF516Q92618 1163 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 MRPS31Q92665 395 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 MYLPFQ96A32 169 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 SYT15Q9BQS2 421 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 MRPL45Q9BRJ2 306 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 THG1LQ9NWX6 298 aaKnown RBP16.63■□□□□ 0.25
SEC13-210ENST00000428626 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
SEC13-210ENST00000428626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
SEC13-210ENST00000428626 C2orf78A6NCI8 922 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 TNNC2P02585 160 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 WARSP23381 471 aaKnown RBP16.62■□□□□ 0.25
SEC13-210ENST00000428626 PCSK1P29120 753 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 USP46P62068 366 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 PUM1Q14671 1186 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEC13-210ENST00000428626 ZNF77Q15935 545 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 SNRNP35Q16560 246 aaKnown RBP16.62■□□□□ 0.25
SEC13-210ENST00000428626 TMEM196Q5HYL7 178 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 DPH6Q7L8W6 267 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 DGLUCYQ7Z3D6 616 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 SPATA2LQ8IUW3 424 aaPredicted RBP16.62■□□□□ 0.25
SEC13-210ENST00000428626 GRAMD1CQ8IYS0 662 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 PLEKHO2Q8TD55 490 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 FUBP3Q96I24 572 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEC13-210ENST00000428626 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 TRPC7Q9HCX4 862 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 GCNT4Q9P109 453 aa16.62■□□□□ 0.25
SEC13-210ENST00000428626 ZMYM5Q9UJ78 669 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms