RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 ARL5CA6NH57 179 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 F8VP50 259 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 HUS1O60921 280 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 THP07101 528 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 SETSIPP0DME0 302 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 SSR1P43307 286 aaKnown RBP28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 LRRC38Q5VT99 294 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 EMBQ6PCB8 327 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 TTC30AQ86WT1 665 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 MIS12Q9H081 205 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 TSPYL2Q9H2G4 693 aaPredicted RBP28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 METTL5Q9NRN9 209 aaKnown RBP28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 MIOSQ9NXC5 875 aa28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.07■■■□□ 2.08
SH3GL3-202ENST00000427482 A0A1W2PQ45 241 aaPredicted RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 A0A1W2PQY0 241 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 HCRTO43612 131 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 RARAP10276 462 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 DHX34Q14147 1143 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 ADGRF2Q8IZF7 708 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 EIF1ADQ8N9N8 165 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 SLC43A3Q8NBI5 491 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 ZNF784Q8NCA9 323 aaPredicted RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 EXD1Q8NHP7 514 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 IFT81Q8WYA0 676 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 SAGE1Q9NXZ1 904 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 WARSP23381 471 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 AFF1P51825 1210 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 DR1Q01658 176 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 C12orf50Q8NA57 414 aaPredicted RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 MAGOHBQ96A72 148 aaKnown RBP28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 ST7Q9NRC1 585 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 NFU1Q9UMS0 254 aa28.06■■■□□ 2.08
SH3GL3-202ENST00000427482 TCF4P15884 667 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 PSMA2P25787 234 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 LMO2P25791 158 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 HTRA3P83110 453 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 CUL1Q13616 776 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 TRADDQ15628 312 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 MAIP1Q8WWC4 291 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 SEC14L1Q92503 715 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 CAVIN3Q969G5 261 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 DNAI2Q9GZS0 605 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 VIPAS39Q9H9C1 493 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 HESX1Q9UBX0 185 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 PCYOX1Q9UHG3 505 aa28.05■■■□□ 2.08
SH3GL3-202ENST00000427482 A0A0U1RQF3 1178 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 FAM187AA6NFU0 413 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 E5RJQ4 531 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 PDGFRBP09619 1106 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 FAM163BP0C2L3 166 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 GJC1P36383 396 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 GDAP1L1Q96MZ0 367 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 ADAM2Q99965 735 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 LPIN3Q9BQK8 851 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 TRPV6Q9H1D0 765 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 CKBP12277 381 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 SCNN1GP51170 649 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 NNTQ13423 1086 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 SND1Q7KZF4 910 aaKnown RBP eCLIP28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 OSTM1Q86WC4 334 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 CCDC50Q8IVM0 306 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 SLC35F5Q8WV83 523 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 HERPUD2Q9BSE4 406 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 SLC4A5Q9BY07 1137 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 STARD7Q9NQZ5 370 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 PTCH2Q9Y6C5 1203 aa28.04■■■□□ 2.08
SH3GL3-202ENST00000427482 CYB561D2O14569 222 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 PTGIRP43119 386 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 FAM102AQ5T9C2 384 aaPredicted RBP28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 PMF1Q6P1K2 205 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 TTC27Q6P3X3 843 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 FAM183BPQ6ZVS7 135 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 STK32AQ8WU08 396 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 RUNDC3BQ96NL0 473 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 UBXN6Q9BZV1 441 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 RSAD1Q9HA92 442 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 CACNG4Q9UBN1 327 aa28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 UTP11Q9Y3A2 253 aaKnown RBP28.03■■■□□ 2.08
SH3GL3-202ENST00000427482 TULP2O00295 520 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 LLGL1Q15334 1064 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 TRAF7Q6Q0C0 670 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 EMC1Q8N766 993 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 TNIP3Q96KP6 325 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 TRIM51Q9BSJ1 452 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 RAB17Q9H0T7 212 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 LRRC19Q9H756 370 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 PODXLO00592 558 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 CCDC130P13994 396 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 IGFBP6P24592 240 aaPredicted RBP28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 ECHS1P30084 290 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 COILP38432 576 aaPredicted RBP28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 FNTAP49354 379 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 RGS7P49802 495 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 CLCNKBP51801 687 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 PDE4CQ08493 712 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 OR6B2Q6IFH4 312 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 CCDC137Q6PK04 289 aaKnown RBP28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 JAMLQ86YT9 394 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms