RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TTC17Q96AE7 1141 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 PORCNQ9H237 461 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 TXLNGQ9NUQ3 528 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 SLC5A4Q9NY91 659 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 DONSONQ9NYP3 566 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 OATP04181 439 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 CDO1Q16878 200 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 MDH1BQ5I0G3 518 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 PALM2Q8IXS6 379 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 TRAPPC12Q8WVT3 735 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 RSAD2Q8WXG1 361 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 SYNCQ9H7C4 482 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 HMGXB4Q9UGU5 601 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 ZFP69BQ9UJL9 534 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 GJA3Q9Y6H8 435 aa15.1■□□□□ 0.01
ERCC3-202ENST00000426778 LRCH4O75427 683 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 ABHD2P08910 425 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 ABL2P42684 1182 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 CPA2P48052 419 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 YARSP54577 528 aaKnown RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 MORF4L2Q15014 288 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 TRIM72Q6ZMU5 477 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 TTC7BQ86TV6 843 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 TEX2Q8IWB9 1127 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 SPDL1Q96EA4 605 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 ASCC2Q9H1I8 757 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 R3HDMLQ9H3Y0 253 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 METTL5Q9NRN9 209 aaKnown RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 PPP1R1BQ9UD71 204 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 ACTL7BQ9Y614 415 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 F5H423 210 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 PEX11AO75192 247 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 STAM2O75886 525 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 GEMIN4P57678 1058 aaKnown RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 GHRHRQ02643 423 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 TRPC3Q13507 836 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 RFX6Q8HWS3 928 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 TMEM35BQ8NCS4 154 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 FAM111AQ96PZ2 611 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 PLCD4Q9BRC7 762 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 DENND2DQ9H6A0 471 aaPredicted RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 ARMCX1Q9P291 453 aa15.09■□□□□ 0.01
ERCC3-202ENST00000426778 XPO7Q9UIA9 1087 aaKnown RBP15.09■□□□□ 0.01
ERCC3-202ENST00000426778 ATP2A1O14983 1001 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 PRPF4O43172 522 aaKnown RBP eCLIP15.08■□□□□ 0
ERCC3-202ENST00000426778 B4GALT5O43286 388 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 ASS1P00966 412 aaKnown RBP15.08■□□□□ 0
ERCC3-202ENST00000426778 KRT3P12035 628 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 BACE1P56817 501 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 PSMC1P62191 440 aaKnown RBP15.08■□□□□ 0
ERCC3-202ENST00000426778 LMNB2Q03252 620 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 NR1H3Q13133 447 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 ACVR2BQ13705 512 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 RELL1Q8IUW5 271 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 CCHCR1Q8TD31 782 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 MIPEPQ99797 713 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 ZNF395Q9H8N7 513 aaPredicted RBP15.08■□□□□ 0
ERCC3-202ENST00000426778 TCRBV5S1A1TA0A578 114 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0
ERCC3-202ENST00000426778 MCCD1P59942 119 aaPredicted RBP15.08■□□□□ 0
ERCC3-202ENST00000426778 GRAMD1AQ96CP6 724 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 VCPIP1Q96JH7 1222 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 TTC25Q96NG3 672 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 CPXM1Q96SM3 734 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 MECRQ9BV79 373 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 LRMDAQ9H2I8 198 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 HACL1Q9UJ83 578 aa15.08■□□□□ 0
ERCC3-202ENST00000426778 CCDC195A0A1B0GUA6 201 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 C3orf70A6NLC5 250 aaPredicted RBP15.07■□□□□ 0
ERCC3-202ENST00000426778 BGNP21810 368 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 ALDH3A1P30838 453 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 YWHAGP61981 247 aaKnown RBP eCLIP15.07■□□□□ 0
ERCC3-202ENST00000426778 ZNF699Q32M78 642 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 FKBP1CQ5VVH2 108 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 RNF149Q8NC42 400 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 SLC35B2Q8TB61 432 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 SERAC1Q96JX3 654 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 DHX33Q9H6R0 707 aaKnown RBP15.07■□□□□ 0
ERCC3-202ENST00000426778 PCDH9Q9HC56 1237 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 ARL8BQ9NVJ2 186 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 HEY2Q9UBP5 337 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 AFG3L2Q9Y4W6 797 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 ADGRA2Q96PE1 1338 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 CALB1P05937 261 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 SERPINB3P29508 390 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 ELK3P41970 407 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 NAMPTP43490 491 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 ZNF132P52740 706 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 DSTYKQ6XUX3 929 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 APBB1IPQ7Z5R6 666 aaPredicted RBP15.07■□□□□ 0
ERCC3-202ENST00000426778 RIBC1Q8N443 379 aaPredicted RBP15.07■□□□□ 0
ERCC3-202ENST00000426778 KCTD6Q8NC69 237 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 DTX3LQ8TDB6 740 aa15.07■□□□□ 0
ERCC3-202ENST00000426778 CFAP36Q96G28 342 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms