RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 DDX23Q9BUQ8 820 aaKnown RBP13.63□□□□□ -0.23
GPC1-204ENST00000426280 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
GPC1-204ENST00000426280 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
GPC1-204ENST00000426280 APOBEC3GQ9HC16 384 aaKnown RBP13.63□□□□□ -0.23
GPC1-204ENST00000426280 HMGXB4Q9UGU5 601 aa13.63□□□□□ -0.23
GPC1-204ENST00000426280 TRIM49BA6NDI0 452 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 ARNTLO00327 626 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 CALUO43852 315 aaPredicted RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 PHACTR2O75167 634 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 STAU1O95793 577 aaKnown RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 PTPN1P18031 435 aaKnown RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 GDI1P31150 447 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 GCLMP48507 274 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 VAMP7P51809 220 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 ADAM9Q13443 819 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 TRPC3Q13507 836 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 MLF2Q15773 248 aaPredicted RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 NFE2Q16621 373 aaPredicted RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 NFIL3Q16649 462 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 MDH1BQ5I0G3 518 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 WDR44Q5JSH3 913 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 ANKRD40Q6AI12 368 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 SCARA5Q6ZMJ2 495 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 ITIH5Q86UX2 942 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 ALYREFQ86V81 257 aaKnown RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 SPATA2LQ8IUW3 424 aaPredicted RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 TTC8Q8TAM2 541 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 SPATA18Q8TC71 538 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 CYP2S1Q96SQ9 504 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 TRMT61BQ9BVS5 477 aaKnown RBP13.62□□□□□ -0.23
GPC1-204ENST00000426280 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 MAN1B1Q9UKM7 699 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 CDH9Q9ULB4 789 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 CCL26Q9Y258 94 aa13.62□□□□□ -0.23
GPC1-204ENST00000426280 COL4A2P08572 1712 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 NOL4O94818 638 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 HLA-DRAP01903 254 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 PSMC3P17980 439 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 PCSK1P29120 753 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 ATICP31939 592 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 CAMK4Q16566 473 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 ZNF658Q5TYW1 1059 aaPredicted RBP13.61□□□□□ -0.23
GPC1-204ENST00000426280 MFSD6LQ8IWD5 586 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 CCDC105Q8IYK2 499 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 MAB21L3Q8N8X9 362 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 DTWD2Q8NBA8 298 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 TWNKQ96RR1 684 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 ZNF518BQ9C0D4 1074 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 SNX25Q9H3E2 840 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 TASP1Q9H6P5 420 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 MMRN2Q9H8L6 949 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 ABCB6Q9NP58 842 aa13.61□□□□□ -0.23
GPC1-204ENST00000426280 MAGEC2Q9UBF1 373 aaPredicted RBP13.61□□□□□ -0.23
GPC1-204ENST00000426280 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
GPC1-204ENST00000426280 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
GPC1-204ENST00000426280 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
GPC1-204ENST00000426280 SOX9P48436 509 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 TNNC1P63316 161 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 VEPH1Q14D04 833 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 ZNF699Q32M78 642 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 TPRG1Q6ZUI0 275 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 MAML2Q8IZL2 1156 aaPredicted RBP13.6□□□□□ -0.23
GPC1-204ENST00000426280 ADSSL1Q8N142 457 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 USP13Q92995 863 aaPredicted RBP13.6□□□□□ -0.23
GPC1-204ENST00000426280 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
GPC1-204ENST00000426280 SYAP1Q96A49 352 aaPredicted RBP13.6□□□□□ -0.23
GPC1-204ENST00000426280 CCDC34Q96HJ3 373 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 MYRFLQ96LU7 910 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 GPR88Q9GZN0 384 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 BRD9Q9H8M2 597 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 SIT1Q9Y3P8 196 aa13.6□□□□□ -0.23
GPC1-204ENST00000426280 ZDBF2Q9HCK1 2354 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 KANSL1LA0AUZ9 987 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 C2orf78A6NCI8 922 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 OTOL1A6NHN0 477 aaPredicted RBP13.59□□□□□ -0.23
GPC1-204ENST00000426280 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 A8MXQ7 604 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 F8VP50 259 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 IKBKBO14920 756 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 MAPK13O15264 365 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 BEST1O76090 585 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 ASS1P00966 412 aaKnown RBP13.59□□□□□ -0.23
GPC1-204ENST00000426280 FAM163BP0C2L3 166 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 CSH1P0DML2 217 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms