RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 HOXD11P31277 338 aaPredicted RBP19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 PRCPP42785 496 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 MAGEA11P43364 429 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 NLRP12P59046 1061 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 TNNC1P63316 161 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 PRKCQQ04759 706 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 ADAM9Q13443 819 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 BIRC3Q13489 604 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 SPATA2LQ8IUW3 424 aaPredicted RBP19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 CCDC105Q8IYK2 499 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 DTWD2Q8NBA8 298 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 OR6B3Q8NGW1 331 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 MYCBPAPQ8TBZ2 947 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 PCED1BQ96HM7 432 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 TIGD1Q96MW7 591 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 SDCBP2Q9H190 292 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 SNX25Q9H3E2 840 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 SMYD3Q9H7B4 428 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 SIT1Q9Y3P8 196 aa19.6■□□□□ 0.73
SMARCAL1-205ENST00000425815 SLC38A8A6NNN8 435 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 TADA3O75528 432 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 CSH1P0DML2 217 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 CSH2P0DML3 217 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 PTPN1P18031 435 aaKnown RBP19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 BDNFP23560 247 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 CDC25CP30307 473 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 GDI1P31150 447 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 VAMP7P51809 220 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 RPL10AP62906 217 aaKnown RBP19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 EEF2KMTQ96G04 330 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 SHDQ96IW2 340 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 MYRFLQ96LU7 910 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 GSDMAQ96QA5 445 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 TRPV5Q9NQA5 729 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 HEBP1Q9NRV9 189 aa19.59■□□□□ 0.73
SMARCAL1-205ENST00000425815 KANSL1LA0AUZ9 987 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 PRAMEF12O95522 483 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 TRIM49P0CI25 452 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 TRIM49CP0CI26 452 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 RAP1GAPP47736 663 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 PPP3CAQ08209 521 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 FZD5Q13467 585 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 TAF12Q16514 161 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF699Q32M78 642 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 COBLL1Q53SF7 1204 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 MDH1BQ5I0G3 518 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF658Q5TYW1 1059 aaPredicted RBP19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 C4orf50Q6ZRC1 276 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 SCN4BQ8IWT1 228 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 ELOA2Q8IYF1 753 aaPredicted RBP19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 PJA1Q8NG27 643 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 DEPDC1BQ8WUY9 529 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 DNASE1L2Q92874 299 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 E2F7Q96AV8 911 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 CCDC34Q96HJ3 373 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 SMG9Q9H0W8 520 aaKnown RBP19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 BRD9Q9H8M2 597 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 CIZ1Q9ULV3 898 aaPredicted RBP19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 MAGED2Q9UNF1 606 aaPredicted RBP19.58■□□□□ 0.72
SMARCAL1-205ENST00000425815 A8MXQ7 604 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 RPL13P26373 211 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 PSMC2P35998 433 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 PMS1P54277 932 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 CACNA2D1P54289 1103 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 CYP27A1Q02318 531 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 ENPEPQ07075 957 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 FCHO2Q0JRZ9 810 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 MAPRE1Q15691 268 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 SGSM1Q2NKQ1 1148 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 EDRF1Q3B7T1 1238 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 ARHGAP15Q53QZ3 475 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF667Q5HYK9 610 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 TXNDC8Q6A555 127 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 SPOPLQ6IQ16 392 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 INTS8Q75QN2 995 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 ALYREFQ86V81 257 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 FAM186BQ8IYM0 893 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF687Q8N1G0 1237 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 IRF7Q92985 503 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 TRMT2BQ96GJ1 504 aaKnown RBP19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 SPATA17Q96L03 361 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 B3GNT5Q9BYG0 378 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 FAM86C1Q9NVL1 165 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 RMND1Q9NWS8 449 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 OBP2AQ9NY56 170 aa19.57■□□□□ 0.72
SMARCAL1-205ENST00000425815 FAM170BA6NMN3 283 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZNF263O14978 683 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 HLA-DRAP01903 254 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 GCLMP48507 274 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 ANKRD40Q6AI12 368 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 VSTM1Q6UX27 236 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 TPRG1Q6ZUI0 275 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 PAQR9Q6ZVX9 377 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 ZC3H3Q8IXZ2 948 aaKnown RBP19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 CMTM8Q8IZV2 173 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 MAB21L3Q8N8X9 362 aa19.56■□□□□ 0.72
SMARCAL1-205ENST00000425815 APOBEC3GQ9HC16 384 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms