RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CLDN23Q96B33 292 aa23.05■■□□□ 1.28
CDCP1-202ENST00000425231 GCNAQ96QF7 691 aa23.05■■□□□ 1.28
CDCP1-202ENST00000425231 MRPL45Q9BRJ2 306 aaKnown RBP23.05■■□□□ 1.28
CDCP1-202ENST00000425231 CRTAC1Q9NQ79 661 aa23.05■■□□□ 1.28
CDCP1-202ENST00000425231 OBP2AQ9NY56 170 aa23.05■■□□□ 1.28
CDCP1-202ENST00000425231 CACNA1IQ9P0X4 2223 aa23.05■■□□□ 1.28
CDCP1-202ENST00000425231 ZFHX2Q9C0A1 2572 aaPredicted RBP23.05■■□□□ 1.28
CDCP1-202ENST00000425231 F5P12259 2224 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 LRRIQ3A6PVS8 624 aaPredicted RBP23.04■■□□□ 1.28
CDCP1-202ENST00000425231 TACC1O75410 805 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 ZNF202O95125 648 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 PRAMEF12O95522 483 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 PDGFRBP09619 1106 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 PSMC1P62191 440 aaKnown RBP23.04■■□□□ 1.28
CDCP1-202ENST00000425231 BECN1Q14457 450 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 FRMD5Q7Z6J6 570 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 MAML2Q8IZL2 1156 aaPredicted RBP23.04■■□□□ 1.28
CDCP1-202ENST00000425231 MYRFLQ96LU7 910 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 BCO2Q9BYV7 579 aa23.04■■□□□ 1.28
CDCP1-202ENST00000425231 MAGED2Q9UNF1 606 aaPredicted RBP23.04■■□□□ 1.28
CDCP1-202ENST00000425231 OBSL1O75147 1896 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 MAN2B1O00754 1011 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 GFRA3O60609 400 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 NOL4O94818 638 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 C4BPAP04003 597 aaKnown RBP23.03■■□□□ 1.28
CDCP1-202ENST00000425231 NR3C1P04150 777 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 ATICP31939 592 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 GNL1P36915 607 aaPredicted RBP23.03■■□□□ 1.28
CDCP1-202ENST00000425231 MAGEA11P43364 429 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 TRPC3Q13507 836 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 TDRD10Q5VZ19 366 aaKnown RBP23.03■■□□□ 1.28
CDCP1-202ENST00000425231 YAF2Q8IY57 180 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 CMTM8Q8IZV2 173 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 TRMT2BQ96GJ1 504 aaKnown RBP23.03■■□□□ 1.28
CDCP1-202ENST00000425231 ZMYM5Q9UJ78 669 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 TRAF3IP3Q9Y228 551 aa23.03■■□□□ 1.28
CDCP1-202ENST00000425231 MRPS17Q9Y2R5 130 aaKnown RBP23.03■■□□□ 1.28
CDCP1-202ENST00000425231 SLC38A8A6NNN8 435 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 DPYSL4O14531 572 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 AP3M2P53677 418 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 MLLT6P55198 1093 aaPredicted RBP23.02■■□□□ 1.28
CDCP1-202ENST00000425231 DLG4P78352 724 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 MAPRE1Q15691 268 aaKnown RBP23.02■■□□□ 1.28
CDCP1-202ENST00000425231 C4orf50Q6ZRC1 276 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 ASCL5Q7RTU5 278 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 MAB21L3Q8N8X9 362 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 MYLPFQ96A32 169 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 SMG9Q9H0W8 520 aaKnown RBP23.02■■□□□ 1.28
CDCP1-202ENST00000425231 VRTNQ9H8Y1 702 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 MAGEC2Q9UBF1 373 aaPredicted RBP23.02■■□□□ 1.28
CDCP1-202ENST00000425231 PIAS3Q9Y6X2 628 aa23.02■■□□□ 1.28
CDCP1-202ENST00000425231 NCAM2O15394 837 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 PHACTR2O75167 634 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 TADA3O75528 432 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 MAGEA9P43362 315 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 RPS9P46781 194 aaKnown RBP23.01■■□□□ 1.27
CDCP1-202ENST00000425231 TNNC1P63316 161 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 KCNB1Q14721 858 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 TXNDC8Q6A555 127 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 SCN4BQ8IWT1 228 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 OR6B3Q8NGW1 331 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 MYCBPAPQ8TBZ2 947 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 BPIFB1Q8TDL5 484 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 FAM3CQ92520 227 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 CCDC47Q96A33 483 aaKnown RBP23.01■■□□□ 1.27
CDCP1-202ENST00000425231 SYAP1Q96A49 352 aaPredicted RBP23.01■■□□□ 1.27
CDCP1-202ENST00000425231 PCED1BQ96HM7 432 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 SNX25Q9H3E2 840 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 NXF1Q9UBU9 619 aaKnown RBP23.01■■□□□ 1.27
CDCP1-202ENST00000425231 PTPRDP23468 1912 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 GREB1Q4ZG55 1949 aa23.01■■□□□ 1.27
CDCP1-202ENST00000425231 SOBPA7XYQ1 873 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 VNN1O95497 513 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 SP9P0CG40 484 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 BDNFP23560 247 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 DDX6P26196 483 aaKnown RBP eCLIP23■■□□□ 1.27
CDCP1-202ENST00000425231 ARHGAP29Q52LW3 1261 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 VSTM1Q6UX27 236 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 CELF5Q8N6W0 485 aaKnown RBP23■■□□□ 1.27
CDCP1-202ENST00000425231 ZFYVE19Q96K21 471 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 UXTQ9UBK9 157 aaPredicted RBP23■■□□□ 1.27
CDCP1-202ENST00000425231 NDRG2Q9UN36 371 aaKnown RBP23■■□□□ 1.27
CDCP1-202ENST00000425231 MAPK8IP1Q9UQF2 711 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 PATJQ8NI35 1801 aa23■■□□□ 1.27
CDCP1-202ENST00000425231 PRR23AA6NEV1 266 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CALUO43852 315 aaPredicted RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 KIF20AO95235 890 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CYP27A1Q02318 531 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 BIRC3Q13489 604 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 NCOA4Q13772 614 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 NFIL3Q16649 462 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CEP135Q66GS9 1140 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 MON1AQ86VX9 555 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 TMC2Q8TDI7 906 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CSGALNACT1Q8TDX6 532 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 MRPS31Q92665 395 aaKnown RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 SPATA17Q96L03 361 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 DPEP3Q9H4B8 488 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 SPATA6Q9NWH7 488 aaPredicted RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CCL26Q9Y258 94 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms