RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 LZTFL1Q9NQ48 299 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 CYLDQ9NQC7 956 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 CXXC1Q9P0U4 656 aaPredicted RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 WDR35Q9P2L0 1181 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 TSPAN16Q9UKR8 245 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 GUCA1BQ9UMX6 200 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 REXO2Q9Y3B8 237 aaKnown RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 RB1P06400 928 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 MMP8P22894 467 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 GPD2P43304 727 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 NOMO3P69849 1222 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 ZNF268Q14587 947 aaPredicted RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 TCEAL1Q15170 157 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 CTXN3Q4LDR2 81 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 INTS6LQ5JSJ4 861 aaKnown RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 NAA35Q5VZE5 725 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 ZNF280DQ6N043 979 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 MCOLN2Q8IZK6 566 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 C2orf15Q8WU43 125 aaKnown RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 CLP1Q92989 425 aaKnown RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 C18orf8Q96DM3 657 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 ZSWIM1Q9BR11 485 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 PLVAPQ9BX97 442 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 DPEP3Q9H4B8 488 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 SYNCQ9H7C4 482 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 CHST7Q9NS84 486 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 MARCH5Q9NX47 278 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 UVRAGQ9P2Y5 699 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 HMGXB4Q9UGU5 601 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 LCMT1Q9UIC8 334 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 GTF3C4Q9UKN8 822 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 BACE2Q9Y5Z0 518 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 MRPL42Q9Y6G3 142 aaKnown RBP10.93□□□□□ -0.66
MDC1-205ENST00000425072 MYH10P35580 1976 aa10.93□□□□□ -0.66
MDC1-205ENST00000425072 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 MYBPHLA2RUH7 354 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 M0QYV0 167 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 ATP2C2O75185 946 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 EFEMP2O95967 443 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 CALCAP01258 141 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 SOD2P04179 222 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 CYP1A2P05177 515 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 FAM200BP0CF97 657 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 ACAT1P24752 427 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 TKTP29401 623 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 BMPR1AP36894 532 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 BCAT1P54687 386 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 CREMQ03060 361 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 TAP1Q03518 808 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 BST2Q10589 180 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 GPR17Q13304 367 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 ORC1Q13415 861 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 GOLGA7BQ2TAP0 167 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 MDH1BQ5I0G3 518 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 DENND1BQ6P3S1 775 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 ZDHHC17Q8IUH5 632 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 SPATA2LQ8IUW3 424 aaPredicted RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 PASD1Q8IV76 773 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 WDTC1Q8N5D0 677 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 UBA3Q8TBC4 463 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 IPO4Q8TEX9 1081 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 SLC35F5Q8WV83 523 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.66
MDC1-205ENST00000425072 RNPC3Q96LT9 517 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 SAMD11Q96NU1 681 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 B3GNT5Q9BYG0 378 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 UBE2OQ9C0C9 1292 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 LACRTQ9GZZ8 138 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 ZCWPW1Q9H0M4 648 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 AVENQ9NQS1 362 aaPredicted RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.92□□□□□ -0.66
MDC1-205ENST00000425072 FAM49BQ9NUQ9 324 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 PARVAQ9NVD7 372 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 TAS2R14Q9NYV8 317 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
MDC1-205ENST00000425072 MAFFQ9ULX9 164 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 SCINQ9Y6U3 715 aa10.92□□□□□ -0.66
MDC1-205ENST00000425072 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 USP27XA6NNY8 438 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 F8W810 466 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 XPO1O14980 1071 aaKnown RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 CFHP08603 1231 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 ABCB4P21439 1286 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 ADORA2BP29275 332 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 ARHGAP25P42331 645 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 GABRB2P47870 512 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 HADHBP55084 474 aaKnown RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 PSMC1P62191 440 aaKnown RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 ETF1P62495 437 aaKnown RBP10.91□□□□□ -0.66
MDC1-205ENST00000425072 SHHQ15465 462 aa10.91□□□□□ -0.66
MDC1-205ENST00000425072 PKDCCQ504Y2 493 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms