RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 RPL10AP62906 217 aaKnown RBP23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 DDR2Q16832 855 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 SDHAF4Q5VUM1 108 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 POTEHQ6S545 545 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 SCN4BQ8IWT1 228 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 SLC44A3Q8N4M1 653 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 CCDC150Q8NCX0 1101 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 ASIC4Q96FT7 647 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 PCED1BQ96HM7 432 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 KXD1Q9BQD3 176 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 NUP62CLQ9H1M0 184 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 SLITRK6Q9H5Y7 841 aa23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 MAGEC2Q9UBF1 373 aaPredicted RBP23.83■■□□□ 1.41
PTCHD3P2-201ENST00000424937 GABRR2P28476 465 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ASPAP45381 313 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 MCCD1P59942 119 aaPredicted RBP23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CCDC40Q4G0X9 1142 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 HFE2Q6ZVN8 426 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 B3GALNT2Q8NCR0 500 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 MYCBPAPQ8TBZ2 947 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 APOBEC3GQ9HC16 384 aaKnown RBP23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ANAPC1Q9H1A4 1944 aa23.82■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FGF19O95750 216 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 PTPN1P18031 435 aaKnown RBP23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 BDNFP23560 247 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FOXR2Q6PJQ5 311 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GAREM2Q75VX8 874 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GCNAQ96QF7 691 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 RPP25Q9BUL9 199 aaKnown RBP23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 NIF3L1Q9GZT8 377 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ATXN3LQ9H3M9 355 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 METTL14Q9HCE5 456 aaKnown RBP23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 MAGED2Q9UNF1 606 aaPredicted RBP23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 KMT2EQ8IZD2 1858 aa23.81■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GOLGA6L22H0YM25 854 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 LRRN2O75325 713 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CSH1P0DML2 217 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CSH2P0DML3 217 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 MAGEA11P43364 429 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CBWD6Q4V339 395 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CBWD3Q5JTY5 395 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CBWD5Q5RIA9 395 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 STXBP5Q5T5C0 1151 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FILIP1Q7Z7B0 1213 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FBXL13Q8NEE6 735 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 SEMA4DQ92854 862 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 SLC35C1Q96A29 364 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ZSWIM3Q96MP5 696 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 BCO2Q9BYV7 579 aa23.8■■□□□ 1.4
PTCHD3P2-201ENST00000424937 SRFP11831 508 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CDC25CP30307 473 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CYP4F8P98187 520 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ORC1Q13415 861 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FAM78AQ5JUQ0 283 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 VSTM1Q6UX27 236 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FRMD5Q7Z6J6 570 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ZSCAN18Q8TBC5 510 aaPredicted RBP23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 PBXIP1Q96AQ6 731 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ASB16Q96NS5 453 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 IL21Q9HBE4 155 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 RAB20Q9NX57 234 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 HMGXB4Q9UGU5 601 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FBXL21Q9UKT6 434 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 PATJQ8NI35 1801 aa23.79■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CFHP08603 1231 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 HMGA1P17096 107 aaKnown RBP23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GRIK1P39086 918 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 NDST1P52848 882 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ARHGAP15Q53QZ3 475 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ACOT1Q86TX2 421 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 TNIP3Q96KP6 325 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ZNF518BQ9C0D4 1074 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GPR88Q9GZN0 384 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 MYO16Q9Y6X6 1858 aa23.78■■□□□ 1.4
PTCHD3P2-201ENST00000424937 TICRRQ7Z2Z1 1910 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 SLC38A8A6NNN8 435 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CLDN5O00501 218 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ECI2O75521 394 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 NOL4O94818 638 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CD58P19256 250 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 FCARP24071 287 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ANXA13P27216 316 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GPR158Q5T848 1215 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 TANGO2Q6ICL3 276 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 GPT2Q8TD30 523 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 SMARCD2Q92925 531 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 MED10Q9BTT4 135 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 SRRTQ9BXP5 876 aaKnown RBP23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 B3GNT5Q9BYG0 378 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ELOVL4Q9GZR5 314 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 CYP3A43Q9HB55 503 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ZFP14Q9HCL3 533 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 RWDD2AQ9UIY3 292 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ZNF318Q5VUA4 2279 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 ATP8B3O60423 1300 aa23.77■■□□□ 1.4
PTCHD3P2-201ENST00000424937 HELZP42694 1942 aaKnown RBP23.76■■□□□ 1.39
PTCHD3P2-201ENST00000424937 ZDBF2Q9HCK1 2354 aa23.76■■□□□ 1.39
PTCHD3P2-201ENST00000424937 TRIM66O15016 1216 aa23.76■■□□□ 1.39
PTCHD3P2-201ENST00000424937 PDGFBP01127 241 aaPredicted RBP23.76■■□□□ 1.39
PTCHD3P2-201ENST00000424937 INCA1Q0VD86 236 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms