RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 WNT7BP56706 349 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 MYL7Q01449 175 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 MTF1Q14872 753 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 DDR2Q16832 855 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 INTS6LQ5JSJ4 861 aaKnown RBP18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 STPG1Q5TH74 334 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 LRRC52Q8N7C0 313 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 C1orf127Q8N9H9 656 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 SPATA18Q8TC71 538 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 OSCP1Q8WVF1 389 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 EPSTI1Q96J88 318 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 ACCSQ96QU6 501 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 PKMYT1Q99640 499 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 TMEM206Q9H813 350 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 ECT2Q9H8V3 914 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 MRPL44Q9H9J2 332 aaKnown RBP18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 POLR3BQ9NW08 1133 aaPredicted RBP18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 DUS2Q9NX74 493 aaKnown RBP18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 STK17AQ9UEE5 414 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 ANGPTL2Q9UKU9 493 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 KIAA1549LQ6ZVL6 1849 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 MYO16Q9Y6X6 1858 aa18.12■□□□□ 0.49
UPF3AP3-201ENST00000420996 MAP1BP46821 2468 aaKnown RBP18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 CD2BP2O95400 341 aaKnown RBP18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 LDHAP00338 332 aaKnown RBP18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 USP17L7P0C7H9 530 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 GAP43P17677 238 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 MPLP40238 635 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 KCNA1Q09470 495 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 ZNF77Q15935 545 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 PLK5Q496M5 336 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 N4BP2L1Q5TBK1 243 aaPredicted RBP18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 USP49Q70CQ1 688 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 SYT13Q7L8C5 426 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 BRSK2Q8IWQ3 736 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 ZSWIM2Q8NEG5 633 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 HHIPQ96QV1 700 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 CYP2S1Q96SQ9 504 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 VPS45Q9NRW7 570 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 CCDC39Q9UFE4 941 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 GTF3C4Q9UKN8 822 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 ITGA11Q9UKX5 1188 aa18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.11■□□□□ 0.49
UPF3AP3-201ENST00000420996 CNOT1A5YKK6 2376 aaKnown RBP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 TRAV19A0A0A6YYK7 116 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 TULP1O00294 542 aaPredicted RBP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 GARTP22102 1010 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 ACAT1P24752 427 aaKnown RBP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 PMLP29590 882 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 IFNAR2P48551 515 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 LHX1P48742 406 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 CFAP221Q4G0U5 840 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 NAIF1Q69YI7 327 aaPredicted RBP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 CSGALNACT2Q8N6G5 542 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 RPLP0P6Q8NHW5 317 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 CXorf38Q8TB03 319 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 CD101Q93033 1021 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 ATP2A3Q93084 1043 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 DNAJC19Q96DA6 116 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 SAAL1Q96ER3 474 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 FUBP3Q96I24 572 aaKnown RBP eCLIP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 SLC22A12Q96S37 553 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 DUSP15Q9H1R2 295 aaPredicted RBP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 SMOC1Q9H4F8 434 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 TRPC7Q9HCX4 862 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 RBAKQ9NYW8 714 aaPredicted RBP18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 TBC1D7Q9P0N9 293 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 EBF1Q9UH73 591 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 PCDHB13Q9Y5F0 798 aa18.1■□□□□ 0.49
UPF3AP3-201ENST00000420996 MYMKA6NI61 221 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 GABRDO14764 452 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 RHOBTB1O94844 696 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 APBB3O95704 486 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 CKMP06732 381 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 PCSK1P29120 753 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 RBP5P82980 135 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 SHC2P98077 582 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 USP4Q13107 963 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 NR1H3Q13133 447 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 DMC1Q14565 340 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 ELF2Q15723 593 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 RRAGBQ5VZM2 374 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 SV2BQ7L1I2 683 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 OSTM1Q86WC4 334 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 SPATA2LQ8IUW3 424 aaPredicted RBP18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 TOP6BLQ8N6T0 577 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 FSIP1Q8NA03 581 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 EZH1Q92800 747 aaPredicted RBP18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 ACDQ96AP0 544 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 LSM14BQ9BX40 385 aaKnown RBP18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 GCNT4Q9P109 453 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 SNX9Q9Y5X1 595 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 WNT6Q9Y6F9 365 aa18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 HELZP42694 1942 aaKnown RBP18.09■□□□□ 0.49
UPF3AP3-201ENST00000420996 GCNT3O95395 438 aa18.08■□□□□ 0.48
UPF3AP3-201ENST00000420996 TCF3P15923 654 aa18.08■□□□□ 0.48
UPF3AP3-201ENST00000420996 MAGEA11P43364 429 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms