RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 DDR2Q16832 855 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
SSBP3-206ENST00000420121 CFAP221Q4G0U5 840 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 ZNF852Q6ZMS4 543 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 FAM200AQ8TCP9 573 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 NELL1Q92832 810 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 ZFYVE19Q96K21 471 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 NELL2Q99435 816 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 BCO2Q9BYV7 579 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 SMG9Q9H0W8 520 aaKnown RBP11.84□□□□□ -0.51
SSBP3-206ENST00000420121 XYLT2Q9H1B5 865 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 KCTD10Q9H3F6 313 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 CRTAC1Q9NQ79 661 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 DMAC2Q9NW81 257 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 PIAS3Q9Y6X2 628 aa11.84□□□□□ -0.51
SSBP3-206ENST00000420121 NOL4O94818 638 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 DLATP10515 647 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 TDGF1P13385 188 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 WARSP23381 471 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 SOX9P48436 509 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CASP4P49662 377 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 MLLT6P55198 1093 aaPredicted RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 PSMC1P62191 440 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 MYO1EQ12965 1108 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 TXNDC11Q6PKC3 985 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CEP57L1Q8IYX8 460 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 TMEM174Q8WUU8 243 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CHFRQ96EP1 664 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 TRMT2BQ96GJ1 504 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 MYRFLQ96LU7 910 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 SYT15Q9BQS2 421 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CHRDQ9H2X0 955 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 PRMT8Q9NR22 394 aaPredicted RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 SPATA6Q9NWH7 488 aaPredicted RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CGNQ9P2M7 1197 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 FBXO4Q9UKT5 387 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 NDRG2Q9UN36 371 aaKnown RBP11.83□□□□□ -0.52
SSBP3-206ENST00000420121 CCL26Q9Y258 94 aa11.83□□□□□ -0.52
SSBP3-206ENST00000420121 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 SLC38A8A6NNN8 435 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MAN2B1O00754 1011 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 TACC1O75410 805 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
SSBP3-206ENST00000420121 CSH1P0DML2 217 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 CSH2P0DML3 217 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 CHRNB1P11230 501 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 TNNI1P19237 187 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 CCNE1P24864 410 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 PCSK1P29120 753 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MAGEA11P43364 429 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 NDUFA8P51970 172 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 CLDN10P78369 228 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MTAPQ13126 283 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 GAS6Q14393 721 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 ZNF528Q3MIS6 628 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 ARHGAP29Q52LW3 1261 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 ARHGAP15Q53QZ3 475 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 TXNDC8Q6A555 127 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 HS2ST1Q7LGA3 356 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MAB21L3Q8N8X9 362 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 BPIFB1Q8TDL5 484 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 PARD3BQ8TEW8 1205 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 FAM3CQ92520 227 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 USP13Q92995 863 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MYLPFQ96A32 169 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 SPATA32Q96LK8 384 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 GOLPH3LQ9H4A5 285 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 GTSE1Q9NYZ3 720 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 CDH9Q9ULB4 789 aa11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MRPS17Q9Y2R5 130 aaKnown RBP11.82□□□□□ -0.52
SSBP3-206ENST00000420121 MYH10P35580 1976 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 EML5Q05BV3 1969 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 LRRIQ3A6PVS8 624 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SPECC1L-ADORA2AF8WAN1 911 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 NCAM2O15394 837 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 LAMTOR5O43504 91 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 VNN1O95497 513 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 PDGFRBP09619 1106 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 CTHP32929 405 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 CLCN6P51797 869 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 MYL6P60660 151 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 RPL10AP62906 217 aaKnown RBP11.81□□□□□ -0.52
SSBP3-206ENST00000420121 KRT85P78386 507 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 TNK2Q07912 1038 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 PSMD2Q13200 908 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 C1orf220Q5T0J3 134 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
SSBP3-206ENST00000420121 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 MON1AQ86VX9 555 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SPATA2LQ8IUW3 424 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-206ENST00000420121 SLC9A9Q8IVB4 645 aa11.81□□□□□ -0.52
SSBP3-206ENST00000420121 YAF2Q8IY57 180 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms