RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 HEBP1Q9NRV9 189 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 DLGAP2Q9P1A6 1054 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 UXTQ9UBK9 157 aaPredicted RBP17.61■□□□□ 0.41
LINC00404-201ENST00000418660 NXF1Q9UBU9 619 aaKnown RBP17.61■□□□□ 0.41
LINC00404-201ENST00000418660 NCANO14594 1321 aa17.61■□□□□ 0.41
LINC00404-201ENST00000418660 IKBKBO14920 756 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 NOL4O94818 638 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 NR2F2P24468 414 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 PNOCQ13519 176 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 NCOA4Q13772 614 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 VSTM1Q6UX27 236 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 TPRG1Q6ZUI0 275 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 TMEM150AQ86TG1 271 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 SCN4BQ8IWT1 228 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 YAF2Q8IY57 180 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 OR6B3Q8NGW1 331 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 MYCBPAPQ8TBZ2 947 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 MYLPFQ96A32 169 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 TRMT2BQ96GJ1 504 aaKnown RBP17.6■□□□□ 0.41
LINC00404-201ENST00000418660 MYRFLQ96LU7 910 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 SLC46A2Q9BY10 475 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 FAM86C1Q9NVL1 165 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 RMND1Q9NWS8 449 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 OBP2AQ9NY56 170 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 MAGED2Q9UNF1 606 aaPredicted RBP17.6■□□□□ 0.41
LINC00404-201ENST00000418660 NME7Q9Y5B8 376 aa17.6■□□□□ 0.41
LINC00404-201ENST00000418660 SLC38A8A6NNN8 435 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 SOBPA7XYQ1 873 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 DPYSL4O14531 572 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 VNN1O95497 513 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 CD72P21854 359 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 DDX6P26196 483 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00404-201ENST00000418660 RPL13P26373 211 aaKnown RBP17.59■□□□□ 0.41
LINC00404-201ENST00000418660 MRE11P49959 708 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 CYP27A1Q02318 531 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 FAM160A1Q05DH4 1040 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 FCHO2Q0JRZ9 810 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 UBXN2BQ14CS0 331 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 ZNF699Q32M78 642 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 ZACNQ401N2 412 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 ZNF667Q5HYK9 610 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 ZNF852Q6ZMS4 543 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 GPIHBP1Q8IV16 184 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 STKLD1Q8NE28 680 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 PCED1BQ96HM7 432 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 CEP295NLQ96MC4 621 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 PHOX2BQ99453 314 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 LTB4R2Q9NPC1 389 aa17.59■□□□□ 0.41
LINC00404-201ENST00000418660 FAM170BA6NMN3 283 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 A8MXQ7 604 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 MAN2B1O00754 1011 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 CHADO15335 359 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 AKAP3O75969 853 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 GLULP15104 373 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 BDNFP23560 247 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 PSMC2P35998 433 aaKnown RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 VAMP7P51809 220 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 MLLT6P55198 1093 aaPredicted RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 ENPEPQ07075 957 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 ADAM9Q13443 819 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 ANGPT1Q15389 498 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 MDH1BQ5I0G3 518 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 C1orf220Q5T0J3 134 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 INTS8Q75QN2 995 aaKnown RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 SV2AQ7L0J3 742 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 CMTM8Q8IZV2 173 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 MRPS31Q92665 395 aaKnown RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 TAF4BQ92750 862 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 SPATA17Q96L03 361 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 LRRC3BQ96PB8 259 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 GSDMAQ96QA5 445 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 MRPS17Q9Y2R5 130 aaKnown RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 MTF2Q9Y483 593 aaPredicted RBP17.58■□□□□ 0.4
LINC00404-201ENST00000418660 COL4A3Q01955 1670 aa17.58■□□□□ 0.4
LINC00404-201ENST00000418660 SHISA7A6NL88 538 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 ARNTLO00327 626 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 LRRN2O75325 713 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 CLSTN1O94985 981 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 SMC2O95347 1197 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 PRAMEF12O95522 483 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 KRT13P13646 458 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 P4HA1P13674 534 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 GRIK1P39086 918 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 CDH8P55286 799 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 EDRF1Q3B7T1 1238 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 ARHGAP29Q52LW3 1261 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 MON1AQ86VX9 555 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 FAM186BQ8IYM0 893 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 SMYD4Q8IYR2 804 aaPredicted RBP17.57■□□□□ 0.4
LINC00404-201ENST00000418660 CELF5Q8N6W0 485 aaKnown RBP17.57■□□□□ 0.4
LINC00404-201ENST00000418660 MAB21L3Q8N8X9 362 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 BPIFB1Q8TDL5 484 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 CSGALNACT1Q8TDX6 532 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
LINC00404-201ENST00000418660 SMYD3Q9H7B4 428 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms