RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 GCNAQ96QF7 691 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 MRPL45Q9BRJ2 306 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 TRMT61BQ9BVS5 477 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 GTPBP4Q9BZE4 634 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 SNX25Q9H3E2 840 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ZMYM5Q9UJ78 669 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 NOTCH4Q99466 2003 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ATP2C2O75185 946 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 AKAP3O75969 853 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 WEE1P30291 646 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 VIPR2P41587 438 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 MAGEA11P43364 429 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ADAM9Q13443 819 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 MLF2Q15773 248 aaPredicted RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 DDR2Q16832 855 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 EDRF1Q3B7T1 1238 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ZACNQ401N2 412 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ZCWPW2Q504Y3 356 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 COBLL1Q53SF7 1204 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 INTS8Q75QN2 995 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 SV2AQ7L0J3 742 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ARID3BQ8IVW6 561 aaPredicted RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ADSSL1Q8N142 457 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 TRIML1Q8N9V2 468 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 OR6B3Q8NGW1 331 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 DNASE1L2Q92874 299 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 MKNK1Q9BUB5 465 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 TASP1Q9H6P5 420 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 CRTAC1Q9NQ79 661 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 TRPV5Q9NQA5 729 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 NXF1Q9UBU9 619 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 VNN1O95497 513 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 F11P03951 625 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 PSMC2P35998 433 aaKnown RBP17.49■□□□□ 0.39
DDR1-231ENST00000417521 GPR15P49685 360 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 VAMP7P51809 220 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 CCDC142Q17RM4 750 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 SGSM1Q2NKQ1 1148 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 ZNF699Q32M78 642 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 ZNF667Q5HYK9 610 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 STXBP5Q5T5C0 1151 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 GPR158Q5T848 1215 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 VSTM1Q6UX27 236 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 VITQ6UXI7 678 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 MYCBPAPQ8TBZ2 947 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 TAF4BQ92750 862 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 IRF7Q92985 503 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 DOCK6Q96HP0 2047 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 DDX23Q9BUQ8 820 aaKnown RBP17.49■□□□□ 0.39
DDR1-231ENST00000417521 BRD9Q9H8M2 597 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 SIT1Q9Y3P8 196 aa17.49■□□□□ 0.39
DDR1-231ENST00000417521 SOBPA7XYQ1 873 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 HEPACAM2A8MVW5 462 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 PPP1R3GB7ZBB8 358 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 KRT13P13646 458 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 MCCD1P59942 119 aaPredicted RBP17.48■□□□□ 0.39
DDR1-231ENST00000417521 PSMC1P62191 440 aaKnown RBP17.48■□□□□ 0.39
DDR1-231ENST00000417521 GRM2Q14416 872 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 SKOR2Q2VWA4 1001 aaPredicted RBP17.48■□□□□ 0.39
DDR1-231ENST00000417521 C1orf220Q5T0J3 134 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 FAM186BQ8IYM0 893 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 TRMT2BQ96GJ1 504 aaKnown RBP17.48■□□□□ 0.39
DDR1-231ENST00000417521 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 OBP2AQ9NY56 170 aa17.48■□□□□ 0.39
DDR1-231ENST00000417521 UXTQ9UBK9 157 aaPredicted RBP17.48■□□□□ 0.39
DDR1-231ENST00000417521 KANSL1LA0AUZ9 987 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 A8MXQ7 604 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 NOL4O94818 638 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 P4HA1P13674 534 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 PTPN1P18031 435 aaKnown RBP17.47■□□□□ 0.39
DDR1-231ENST00000417521 DDX6P26196 483 aaKnown RBP eCLIP17.47■□□□□ 0.39
DDR1-231ENST00000417521 NLRP12P59046 1061 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 CYP4F8P98187 520 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 SDHAF4Q5VUM1 108 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 KLHL10Q6JEL2 608 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 TMEM150AQ86TG1 271 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 SCN4BQ8IWT1 228 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 PCED1BQ96HM7 432 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 SLC46A2Q9BY10 475 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 OSBPL6Q9BZF3 934 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 MAGED2Q9UNF1 606 aaPredicted RBP17.47■□□□□ 0.39
DDR1-231ENST00000417521 NME7Q9Y5B8 376 aa17.47■□□□□ 0.39
DDR1-231ENST00000417521 WDFY4Q6ZS81 3184 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 SLC38A8A6NNN8 435 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 DPYSL4O14531 572 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 ZNF263O14978 683 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 CETN3O15182 167 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 GDI1P31150 447 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 PMS1P54277 932 aaKnown RBP17.46■□□□□ 0.39
DDR1-231ENST00000417521 CYP27A1Q02318 531 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 FCHO2Q0JRZ9 810 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 MDH1BQ5I0G3 518 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 DTWD2Q8NBA8 298 aa17.46■□□□□ 0.39
DDR1-231ENST00000417521 PJA1Q8NG27 643 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms