RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CCKBRP32239 447 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 IARSP41252 1262 aaKnown RBP3.17□□□□□ -1.9
LINC00428-201ENST00000415620 SSBP2P81877 361 aaPredicted RBP3.17□□□□□ -1.9
LINC00428-201ENST00000415620 FHL1Q13642 323 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 TERF2Q15554 542 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 CYP2A13Q16696 494 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 MST1LQ2TV78 715 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 TSHZ3Q63HK5 1081 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 C11orf87Q6NUJ2 197 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 ZNF480Q8WV37 535 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 PIGBQ92521 554 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 DPF1Q92782 380 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 RNF31Q96EP0 1072 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 PHACTR3Q96KR7 559 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 ZSWIM1Q9BR11 485 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 REXO4Q9GZR2 422 aaKnown RBP3.17□□□□□ -1.9
LINC00428-201ENST00000415620 MS4A5Q9H3V2 200 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 IFT57Q9NWB7 429 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 THEGQ9P2T0 379 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 MAGEC2Q9UBF1 373 aaPredicted RBP3.17□□□□□ -1.9
LINC00428-201ENST00000415620 ASAP1Q9ULH1 1129 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 CDY2AQ9Y6F7 541 aa3.17□□□□□ -1.9
LINC00428-201ENST00000415620 MAP1BP46821 2468 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 SPEGQ15772 3267 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 ZNF318Q5VUA4 2279 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 SHTN1A0MZ66 631 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 MANSC4A6NHS7 340 aaPredicted RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 PPP1R12AO14974 1030 aaPredicted RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 PRKCGP05129 697 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 ALOX15P16050 662 aaPredicted RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 GPD1P21695 349 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 LSP1P33241 339 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 TM4SF4P48230 202 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 VAV2P52735 878 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 EIF2B5Q13144 721 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 PABPC4Q13310 644 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 MTX3Q5HYI7 312 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 ZNF517Q6ZMY9 492 aaPredicted RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 MED25Q71SY5 747 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 DRC7Q8IY82 874 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 TRMT2AQ8IZ69 625 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 KCNH5Q8NCM2 988 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 PPM1EQ8WY54 764 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 SARAFQ96BY9 339 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 PTCD3Q96EY7 689 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 PAWRQ96IZ0 340 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 RNPEPQ9H4A4 650 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 UNKLQ9H9P5 680 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 CPNE5Q9HCH3 593 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 THG1LQ9NWX6 298 aaKnown RBP3.16□□□□□ -1.9
LINC00428-201ENST00000415620 ENTPD2Q9Y5L3 495 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 COL4A6Q14031 1691 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 SNED1Q8TER0 1413 aa3.16□□□□□ -1.9
LINC00428-201ENST00000415620 COL15A1P39059 1388 aa3.15□□□□□ -1.9
LINC00428-201ENST00000415620 PHF2O75151 1096 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 SERPINB2P05120 415 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 TKTP29401 623 aaKnown RBP3.15□□□□□ -1.91
LINC00428-201ENST00000415620 CCT4P50991 539 aaKnown RBP3.15□□□□□ -1.91
LINC00428-201ENST00000415620 KPNA1P52294 538 aaPredicted RBP3.15□□□□□ -1.91
LINC00428-201ENST00000415620 MRPS5P82675 430 aaKnown RBP3.15□□□□□ -1.91
LINC00428-201ENST00000415620 SP140Q13342 867 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 CCDC93Q567U6 631 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 PITRM1Q5JRX3 1037 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 RUSC1-AS1Q66K80 236 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 FRMD7Q6ZUT3 714 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 MOB2Q70IA6 237 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 THNSL2Q86YJ6 484 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 LTV1Q96GA3 475 aaPredicted RBP3.15□□□□□ -1.91
LINC00428-201ENST00000415620 ERO1AQ96HE7 468 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 WACQ9BTA9 647 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 CDK19Q9BWU1 502 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 FLNBO75369 2602 aaKnown RBP3.15□□□□□ -1.91
LINC00428-201ENST00000415620 DNAH12Q6ZR08 3092 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 ZNF521Q96K83 1311 aa3.15□□□□□ -1.91
LINC00428-201ENST00000415620 VPS13AQ96RL7 3174 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 KMT2EQ8IZD2 1858 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 A0A0G2JMZ2 1700 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 CCDC151A5D8V7 595 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 TP73O15350 636 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 PEX1O43933 1283 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 ERN1O75460 977 aaKnown RBP3.14□□□□□ -1.91
LINC00428-201ENST00000415620 ITPKBP27987 946 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 TUBA4AP68366 448 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 EXOSC10Q01780 885 aaKnown RBP3.14□□□□□ -1.91
LINC00428-201ENST00000415620 TFF2Q03403 129 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 SOGA3Q5TF21 947 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 REPS2Q8NFH8 660 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 RGMAQ96B86 450 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 ANO3Q9BYT9 981 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 KCTD10Q9H3F6 313 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 KANSL2Q9H9L4 492 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 SPTLC3Q9NUV7 552 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 TMEM260Q9NX78 707 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 FLRT1Q9NZU1 646 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 SIK3Q9Y2K2 1263 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 ZFHX2Q9C0A1 2572 aaPredicted RBP3.14□□□□□ -1.91
LINC00428-201ENST00000415620 MAST2Q6P0Q8 1798 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 CD163L1Q9NR16 1453 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 NAV2Q8IVL1 2488 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 AOX1Q06278 1338 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms