RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ACAD10Q6JQN1 1059 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 MMS22LQ6ZRQ5 1243 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 H2AFVQ71UI9 128 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 MON1BQ7L1V2 547 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 FIBCD1Q8N539 461 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 SECISBP2LQ93073 1101 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 ACBD6Q9BR61 282 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 C11orf70Q9BRQ4 267 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 LHX5Q9H2C1 402 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 TMEM30AQ9NV96 361 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 MYO9BQ13459 2157 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 NSFP46459 744 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 ELAVL2Q12926 359 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 PTP4A2Q12974 167 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 MRPL58Q14197 206 aaKnown RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 PTPN20Q4JDL3 420 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 ARHGAP29Q52LW3 1261 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 C10orf76Q5T2E6 689 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 FAM171BQ6P995 826 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 PRSS55Q6UWB4 352 aaPredicted RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 RSPO2Q6UXX9 243 aaPredicted RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 TMEM35BQ8NCS4 154 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 MYLPFQ96A32 169 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 C16orf45Q96MC5 204 aaPredicted RBP10.26□□□□□ -0.77
RIF1-202ENST00000414861 TTPALQ9BTX7 342 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 ZNF518BQ9C0D4 1074 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 GUCA1BQ9UMX6 200 aa10.26□□□□□ -0.77
RIF1-202ENST00000414861 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PATJQ8NI35 1801 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 MACROD2A1Z1Q3 448 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 ANKRD62A6NC57 917 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
RIF1-202ENST00000414861 BEST1O76090 585 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CACNA2D1P54289 1103 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PDCLQ13371 301 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CTXN3Q4LDR2 81 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 ZNF662Q6ZS27 426 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PHLDB2Q86SQ0 1253 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 FAM35AQ86V20 835 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PHF13Q86YI8 300 aaPredicted RBP10.25□□□□□ -0.77
RIF1-202ENST00000414861 MCOLN2Q8IZK6 566 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 MYCBPAPQ8TBZ2 947 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 TMEM169Q96HH4 297 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CPXM1Q96SM3 734 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 HNRNPABQ99729 332 aaKnown RBP10.25□□□□□ -0.77
RIF1-202ENST00000414861 KRT82Q9NSB4 513 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 SPG21Q9NZD8 308 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CEP83Q9Y592 693 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 NCANO14594 1321 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 H0YGN5 161 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 FANCGO15287 622 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CCP110O43303 1012 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 TMEM253P0C7T8 217 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 MMP8P22894 467 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PDE4CQ08493 712 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 STILQ15468 1287 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CYP4A22Q5TCH4 519 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 ZNF280DQ6N043 979 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 PMF1Q6P1K2 205 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 THEM5Q8N1Q8 247 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 ANKRD52Q8NB46 1076 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 ZNF653Q96CK0 615 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 GDF15Q99988 308 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 LUC7LQ9NQ29 371 aaKnown RBP10.25□□□□□ -0.77
RIF1-202ENST00000414861 INTUQ9ULD6 942 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 CAPN6Q9Y6Q1 641 aa10.25□□□□□ -0.77
RIF1-202ENST00000414861 LINC01553A4QN01 128 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 PIK3R2O00459 728 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 C2CD2LO14523 706 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 ADAM12O43184 909 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 BUB1O43683 1085 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 TBC1D4O60343 1298 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 GABBR2O75899 941 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 SOD2P04179 222 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 ERBB2P04626 1255 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 RPL17P18621 184 aaKnown RBP10.24□□□□□ -0.77
RIF1-202ENST00000414861 RRM1P23921 792 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 RGS7P49802 495 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 BCAT1P54687 386 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 TSPY1Q01534 308 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 SLC39A12Q504Y0 691 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 SLC35F5Q8WV83 523 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 CTNNBL1Q8WYA6 563 aaPredicted RBP10.24□□□□□ -0.77
RIF1-202ENST00000414861 RIN2Q8WYP3 895 aaPredicted RBP10.24□□□□□ -0.77
RIF1-202ENST00000414861 MED10Q9BTT4 135 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 ZCWPW1Q9H0M4 648 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 OSGEPQ9NPF4 335 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 CHST7Q9NS84 486 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 ADAM22Q9P0K1 906 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 HESX1Q9UBX0 185 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 COG5Q9UP83 839 aa10.24□□□□□ -0.77
RIF1-202ENST00000414861 KRT86O43790 486 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms