RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 MTAPQ13126 283 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 BIRC3Q13489 604 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 BMT2Q1RMZ1 405 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 KMT5BQ4FZB7 885 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 TXNDC8Q6A555 127 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 MAML2Q8IZL2 1156 aaPredicted RBP17.99■□□□□ 0.47
COL6A2-205ENST00000413758 OR6B3Q8NGW1 331 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 KBTBD7Q8WVZ9 684 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 ATRIPQ8WXE1 791 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 CCDC47Q96A33 483 aaKnown RBP17.99■□□□□ 0.47
COL6A2-205ENST00000413758 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 LRRC3BQ96PB8 259 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 USP25Q9UHP3 1055 aa17.99■□□□□ 0.47
COL6A2-205ENST00000413758 NUP210Q8TEM1 1887 aaPredicted RBP17.99■□□□□ 0.47
COL6A2-205ENST00000413758 SHISA7A6NL88 538 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 CST3P01034 146 aaPredicted RBP17.98■□□□□ 0.47
COL6A2-205ENST00000413758 F11P03951 625 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 WARSP23381 471 aaKnown RBP17.98■□□□□ 0.47
COL6A2-205ENST00000413758 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
COL6A2-205ENST00000413758 GRIK1P39086 918 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 PLCB2Q00722 1185 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 PSMD2Q13200 908 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 MAPRE1Q15691 268 aaKnown RBP17.98■□□□□ 0.47
COL6A2-205ENST00000413758 ZNF528Q3MIS6 628 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 WDR72Q3MJ13 1102 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 C1orf228Q6PIY5 440 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 TSSK4Q6SA08 328 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 MYLPFQ96A32 169 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 MSANTD3Q96H12 275 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 FUBP3Q96I24 572 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL6A2-205ENST00000413758 PKMYT1Q99640 499 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 GTSE1Q9NYZ3 720 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 NXF1Q9UBU9 619 aaKnown RBP17.98■□□□□ 0.47
COL6A2-205ENST00000413758 ATP6V1DQ9Y5K8 247 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 CACNA1IQ9P0X4 2223 aa17.98■□□□□ 0.47
COL6A2-205ENST00000413758 SPECC1L-ADORA2AF8WAN1 911 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 ARNTLO00327 626 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 KLRC4O43908 158 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 BDNFP23560 247 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 ANXA13P27216 316 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 WEE1P30291 646 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 SYKP43405 635 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 MYL6P60660 151 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 TNK2Q07912 1038 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 STK4Q13043 487 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 FZD5Q13467 585 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 LRRC32Q14392 662 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 PPP2R5DQ14738 602 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 CFAP221Q4G0U5 840 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 MDH1BQ5I0G3 518 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 CC2D1AQ6P1N0 951 aaPredicted RBP17.97■□□□□ 0.47
COL6A2-205ENST00000413758 FAM171BQ6P995 826 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 TMEM150AQ86TG1 271 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 MON1AQ86VX9 555 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 C12orf56Q8IXR9 622 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
COL6A2-205ENST00000413758 CHRDQ9H2X0 955 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 CRTAC1Q9NQ79 661 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 GKN1Q9NS71 199 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 TDP1Q9NUW8 608 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 ZDHHC9Q9Y397 364 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 PATJQ8NI35 1801 aa17.97■□□□□ 0.47
COL6A2-205ENST00000413758 COL4A2P08572 1712 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 NOL4O94818 638 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 CTHP32929 405 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 MAGEA11P43364 429 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 CASP4P49662 377 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 MLLT6P55198 1093 aaPredicted RBP17.96■□□□□ 0.47
COL6A2-205ENST00000413758 ITPRIPL2Q3MIP1 535 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 RALGPS2Q86X27 583 aaPredicted RBP17.96■□□□□ 0.47
COL6A2-205ENST00000413758 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 KIAA0895Q8NCT3 520 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 ZNF516Q92618 1163 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 USP13Q92995 863 aaPredicted RBP17.96■□□□□ 0.47
COL6A2-205ENST00000413758 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
COL6A2-205ENST00000413758 KIF9Q9HAQ2 790 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 CCL26Q9Y258 94 aa17.96■□□□□ 0.47
COL6A2-205ENST00000413758 ZNF638Q14966 1978 aaKnown RBP17.96■□□□□ 0.47
COL6A2-205ENST00000413758 A8MXQ7 604 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 RPN1P04843 607 aaKnown RBP17.95■□□□□ 0.46
COL6A2-205ENST00000413758 MYL1P05976 194 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 CKMP06732 381 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 ATICP31939 592 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 PON2Q15165 354 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 CEP135Q66GS9 1140 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 VSTM1Q6UX27 236 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 LIMS2Q7Z4I7 341 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 ZNF687Q8N1G0 1237 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 TRMT2BQ96GJ1 504 aaKnown RBP17.95■□□□□ 0.46
COL6A2-205ENST00000413758 IER2Q9BTL4 223 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
COL6A2-205ENST00000413758 RBM12Q9NTZ6 932 aaKnown RBP17.95■□□□□ 0.46
COL6A2-205ENST00000413758 PCDHGA2Q9Y5H1 932 aa17.95■□□□□ 0.46
COL6A2-205ENST00000413758 TRAV19A0A0A6YYK7 116 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 TACC1O75410 805 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 KIF20AO95235 890 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 NR3C1P04150 777 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 USP17L7P0C7H9 530 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 CHRNB1P11230 501 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms