RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 SMARCB1Q12824 385 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 CBWD6Q4V339 395 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 CBWD3Q5JTY5 395 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 CBWD5Q5RIA9 395 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 TANGO2Q6ICL3 276 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 ITIH5Q86UX2 942 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 UBALD2Q8IYN6 164 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 PCED1BQ96HM7 432 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 GTPBP4Q9BZE4 634 aaKnown RBP14.03□□□□□ -0.16
SSB-203ENST00000413002 VRTNQ9H8Y1 702 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 TMEM8AQ9HCN3 771 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 GDE1Q9NZC3 331 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 MAGEC2Q9UBF1 373 aaPredicted RBP14.03□□□□□ -0.16
SSB-203ENST00000413002 ASB3Q9Y575 518 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
SSB-203ENST00000413002 DOCK8Q8NF50 2099 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 SLC16A3O15427 465 aaKnown RBP14.02□□□□□ -0.17
SSB-203ENST00000413002 HMGA1P17096 107 aaKnown RBP14.02□□□□□ -0.17
SSB-203ENST00000413002 CD58P19256 250 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 MXI1P50539 228 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 NOP14P78316 857 aaKnown RBP14.02□□□□□ -0.17
SSB-203ENST00000413002 GPC5P78333 572 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 PAK1Q13153 545 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 CCDC40Q4G0X9 1142 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 IER5LQ5T953 404 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 KRT39Q6A163 491 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 C4orf50Q6ZRC1 276 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 ACOT1Q86TX2 421 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 ZSCAN18Q8TBC5 510 aaPredicted RBP14.02□□□□□ -0.17
SSB-203ENST00000413002 B3GNT5Q9BYG0 378 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 ZNF518BQ9C0D4 1074 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 IL21Q9HBE4 155 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 ARMCX3Q9UH62 379 aaPredicted RBP14.02□□□□□ -0.17
SSB-203ENST00000413002 FBXL21Q9UKT6 434 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 DUSP12Q9UNI6 340 aa14.02□□□□□ -0.17
SSB-203ENST00000413002 SLC38A8A6NNN8 435 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 COL9A1P20849 921 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 FCARP24071 287 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 GRIK1P39086 918 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 NDST1P52848 882 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 RPL10AP62906 217 aaKnown RBP14.01□□□□□ -0.17
SSB-203ENST00000413002 GRM2Q14416 872 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 CFAP221Q4G0U5 840 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 GPR158Q5T848 1215 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 FILIP1Q7Z7B0 1213 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 LEMD2Q8NC56 503 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 B3GALNT2Q8NCR0 500 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 TAF4BQ92750 862 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 TATDN2Q93075 761 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 SLC35C1Q96A29 364 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 GBP4Q96PP9 640 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 MED15Q96RN5 788 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 TWNKQ96RR1 684 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
SSB-203ENST00000413002 IMPG2Q9BZV3 1241 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 SMG9Q9H0W8 520 aaKnown RBP14.01□□□□□ -0.17
SSB-203ENST00000413002 NUP62CLQ9H1M0 184 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 CA14Q9ULX7 337 aa14.01□□□□□ -0.17
SSB-203ENST00000413002 NCANO14594 1321 aa14□□□□□ -0.17
SSB-203ENST00000413002 BICDL2A1A5D9 508 aa14□□□□□ -0.17
SSB-203ENST00000413002 F8VP50 259 aa14□□□□□ -0.17
SSB-203ENST00000413002 MICAL2O94851 1124 aa14□□□□□ -0.17
SSB-203ENST00000413002 FAM163BP0C2L3 166 aa14□□□□□ -0.17
SSB-203ENST00000413002 SRFP11831 508 aa14□□□□□ -0.17
SSB-203ENST00000413002 P4HA1P13674 534 aa14□□□□□ -0.17
SSB-203ENST00000413002 CCDC130P13994 396 aa14□□□□□ -0.17
SSB-203ENST00000413002 GTF2H1P32780 548 aa14□□□□□ -0.17
SSB-203ENST00000413002 PPP1R2P41236 205 aa14□□□□□ -0.17
SSB-203ENST00000413002 MCCD1P59942 119 aaPredicted RBP14□□□□□ -0.17
SSB-203ENST00000413002 ENPEPQ07075 957 aa14□□□□□ -0.17
SSB-203ENST00000413002 LRMPQ12912 555 aa14□□□□□ -0.17
SSB-203ENST00000413002 MAPRE1Q15691 268 aaKnown RBP14□□□□□ -0.17
SSB-203ENST00000413002 MTSS1LQ765P7 747 aa14□□□□□ -0.17
SSB-203ENST00000413002 TMEM150AQ86TG1 271 aa14□□□□□ -0.17
SSB-203ENST00000413002 CREBRFQ8IUR6 639 aa14□□□□□ -0.17
SSB-203ENST00000413002 SIX5Q8N196 739 aa14□□□□□ -0.17
SSB-203ENST00000413002 C12orf29Q8N999 325 aa14□□□□□ -0.17
SSB-203ENST00000413002 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
SSB-203ENST00000413002 FBXL13Q8NEE6 735 aa14□□□□□ -0.17
SSB-203ENST00000413002 SMARCD2Q92925 531 aa14□□□□□ -0.17
SSB-203ENST00000413002 NXPE3Q969Y0 559 aa14□□□□□ -0.17
SSB-203ENST00000413002 RSPRY1Q96DX4 576 aa14□□□□□ -0.17
SSB-203ENST00000413002 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
SSB-203ENST00000413002 CEP63Q96MT8 703 aa14□□□□□ -0.17
SSB-203ENST00000413002 ASB16Q96NS5 453 aa14□□□□□ -0.17
SSB-203ENST00000413002 ARID3AQ99856 593 aa14□□□□□ -0.17
SSB-203ENST00000413002 MED10Q9BTT4 135 aa14□□□□□ -0.17
SSB-203ENST00000413002 BCO2Q9BYV7 579 aa14□□□□□ -0.17
SSB-203ENST00000413002 NIF3L1Q9GZT8 377 aa14□□□□□ -0.17
SSB-203ENST00000413002 ZFP14Q9HCL3 533 aa14□□□□□ -0.17
SSB-203ENST00000413002 FAM49BQ9NUQ9 324 aa14□□□□□ -0.17
SSB-203ENST00000413002 RAB20Q9NX57 234 aa14□□□□□ -0.17
SSB-203ENST00000413002 KRBA1A5PL33 1030 aa13.99□□□□□ -0.17
SSB-203ENST00000413002 STX10O60499 249 aa13.99□□□□□ -0.17
SSB-203ENST00000413002 F11P03951 625 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms