RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ADAD2Q8NCV1 583 aaKnown RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 DEPTORQ8TB45 409 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 TSKUQ8WUA8 353 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 TBC1D5Q92609 795 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF300Q96RE9 604 aaPredicted RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZSWIM1Q9BR11 485 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF700Q9H0M5 742 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 BCL11AQ9H165 835 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 CDIP1Q9H305 208 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 C14orf93Q9H972 538 aaKnown RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 KCNMB3Q9NPA1 279 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 DTX4Q9Y2E6 619 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 TELO2Q9Y4R8 837 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 MAP1BP46821 2468 aaKnown RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 COL15A1P39059 1388 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 PRRC2CQ9Y520 2896 aaKnown RBP-1.1□□□□□ -2.58
RNU4-88P-201ENST00000411220 A0A1B0GTW7 788 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 F8VVB4 439 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 F8VWA3 439 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM72CH0Y354 149 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FOXE1O00358 373 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 NRP1O14786 923 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CTIFO43310 598 aaKnown RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZC3H11AO75152 810 aaKnown RBP eCLIP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 USP1O94782 785 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 SORBS2O94875 1100 aaKnown RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 KLKB1P03952 638 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FGFR4P22455 802 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 GPTP24298 496 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 OPRD1P41143 372 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 KIR2DL3P43628 341 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CCR10P46092 362 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 IRX1P78414 480 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 MGAT3Q09327 533 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ARL16Q0P5N6 197 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ASPHQ12797 758 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CERKLQ49MI3 558 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM72AQ5TYM5 149 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 PLA2G4FQ68DD2 849 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 IQCEQ6IPM2 695 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM72DQ6L9T8 149 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ANKRD26P1Q6NSI1 321 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ARMCX5Q6P1M9 558 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ABHD17CQ6PCB6 329 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 METTL7BQ6UX53 244 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 H1FNTQ75WM6 255 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM72BQ86X60 149 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 LMNTD2Q8IXW0 634 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 FSTL5Q8N475 847 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 SRBD1Q8N5C6 995 aaKnown RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 TOR1AIP2Q8NFQ8 470 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CADM4Q8NFZ8 388 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CHAMP1Q96JM3 812 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 RITA1Q96K30 269 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 MMP28Q9H239 520 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CXXC4Q9H2H0 198 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CNNM2Q9H8M5 875 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 VRTNQ9H8Y1 702 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 EDA2RQ9HAV5 297 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF586Q9NXT0 402 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CLDND1Q9NY35 253 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 SAE1Q9UBE0 346 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 SUCOQ9UBS9 1254 aaKnown RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 PLEKHB1Q9UF11 243 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 MYO6Q9UM54 1294 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 SUFUQ9UMX1 484 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 POLR3KQ9Y2Y1 108 aaPredicted RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 C2CD3Q4AC94 2353 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 GCN1Q92616 2671 aaKnown RBP-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 ATRQ13535 2644 aa-1.1□□□□□ -2.59
RNU4-88P-201ENST00000411220 CBFA2T2O43439 604 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 MAFO75444 373 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 DEDDO75618 318 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 WDR47O94967 919 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM13AO94988 1023 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 HOXC6P09630 235 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 CYP2A6P11509 494 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 MTHFD1P11586 935 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 NPR3P17342 541 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 TBXAS1P24557 533 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 PDLIM4P50479 330 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF75DP51815 510 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 DGKQP52824 942 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 HNRNPH2P55795 449 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 MEF2CQ06413 473 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 LSAMPQ13449 338 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 LDLRAD1Q5T700 205 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 TSHZ3Q63HK5 1081 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 OVOS1Q6IE37 1185 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 RPUSD3Q6P087 351 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 LRSAM1Q6UWE0 723 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 KYAT3Q6YP21 454 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 RFX8Q6ZV50 586 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF804AQ7Z570 1209 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 RTN4RL2Q86UN3 420 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 EPHX4Q8IUS5 362 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 CHERPQ8IWX8 916 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM217AQ8IXS0 508 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 PCSK9Q8NBP7 692 aaKnown RBP-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms