RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PRF1P14222 555 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ATP5F1P24539 256 aaPredicted RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 HSD3B2P26439 372 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ADORA2AP29274 412 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 CYP2C19P33261 490 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 MMP13P45452 471 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 MTMR1Q13613 665 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 RNASE12Q5GAN4 147 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 PLAC9Q5JTB6 97 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 AARS2Q5JTZ9 985 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ARHGAP40Q5TG30 622 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 MIS18BP1Q6P0N0 1132 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 MEPCEQ7L2J0 689 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ZDHHC17Q8IUH5 632 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 LRRC71Q8N4P6 559 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 NANOGP1Q8N7R0 232 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 RBMXL3Q8N7X1 1067 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 TBC1D5Q92609 795 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ASB2Q96Q27 587 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 MMS19Q96T76 1030 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 THAP7Q9BT49 309 aaPredicted RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 CNPPD1Q9BV87 410 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 FSD1LQ9BXM9 530 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 EBF3Q9H4W6 596 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 TRNAU1APQ9NX07 287 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ASIC5Q9NY37 505 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ABCF2Q9UG63 623 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 SAP30BPQ9UHR5 308 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ADAMTS5Q9UNA0 930 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 SCAF8Q9UPN6 1271 aaKnown RBP2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 TRIP12Q14669 1992 aaPredicted RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 CNTNAP2Q9UHC6 1331 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 E5RJQ4 531 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 H3BNC9 293 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 GTPBP1O00178 669 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 SLC16A3O15427 465 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 INSIG1O15503 277 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 ALPLP05186 524 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 CSF1RP07333 972 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 PDCP20941 246 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 SMARCA1P28370 1054 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 CCKARP32238 428 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 PIK3CGP48736 1102 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 RGS19P49795 217 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 CDKN1CP49918 316 aaPredicted RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 MAP2K6P52564 334 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 NANOS2P60321 138 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 PSG6Q00889 435 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 FAM50AQ14320 339 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 SEC23BQ15437 767 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 CYP1B1Q16678 543 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 LEXMQ3ZCV2 418 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 L1TD1Q5T7N2 865 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 ZNF618Q5T7W0 954 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 RGS7BPQ6MZT1 257 aaPredicted RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 ANKRD16Q6P6B7 361 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 SHC4Q6S5L8 630 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 Q6ZWC4 215 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 HEATR3Q7Z4Q2 680 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 PIP4P1Q86T03 277 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 NOP9Q86U38 636 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 COL23A1Q86Y22 540 aaPredicted RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 AOPEPQ8N6M6 819 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 SPATA3Q8NHX4 192 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 XAGE5Q8WWM1 108 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 ATRIPQ8WXE1 791 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 COQ8BQ96D53 544 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 SIDT1Q9NXL6 827 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 TUBA8Q9NY65 449 aaPredicted RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 HESX1Q9UBX0 185 aa2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 NDRG4Q9ULP0 352 aaKnown RBP2.01□□□□□ -2.09
RNU2-55P-201ENST00000411146 LY6G6EA0A0G2JKS1 128 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 AP4M1O00189 453 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 UNC5CO95185 931 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 CBSLP0DN79 551 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 PIM1P11309 404 aaPredicted RBP2□□□□□ -2.09
RNU2-55P-201ENST00000411146 IL1R2P27930 398 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 CBSP35520 551 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 RENBPP51606 427 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 HK3P52790 923 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 SLC16A1P53985 500 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 POLGP54098 1239 aaPredicted RBP2□□□□□ -2.09
RNU2-55P-201ENST00000411146 ITKQ08881 620 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 NOGQ13253 232 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 RAPGEF1Q13905 1077 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 RBMS2Q15434 407 aaKnown RBP2□□□□□ -2.09
RNU2-55P-201ENST00000411146 TRIP6Q15654 476 aaKnown RBP2□□□□□ -2.09
RNU2-55P-201ENST00000411146 PTCHD3Q3KNS1 767 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 DEPDC1Q5TB30 811 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 SYDE2Q5VT97 1194 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 FAM160B1Q5W0V3 765 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 ICE2Q659A1 982 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 KIRREL2Q6UWL6 708 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 TRIM72Q6ZMU5 477 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 PARS2Q7L3T8 475 aaKnown RBP2□□□□□ -2.09
RNU2-55P-201ENST00000411146 CATIPQ7Z7H3 387 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 TTC7BQ86TV6 843 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 KRT73Q86Y46 540 aa2□□□□□ -2.09
RNU2-55P-201ENST00000411146 SLC15A3Q8IY34 581 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 300.5 ms