RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 GPR135Q8IZ08 494 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 BCL6BQ8N143 479 aaPredicted RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 VGLL2Q8N8G2 317 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 FANCBQ8NB91 859 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 C1orf131Q8NDD1 294 aaKnown RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 OR8K1Q8NGG5 319 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 FAM76AQ8TAV0 307 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 COG1Q8WTW3 980 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 ESR2Q92731 530 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 PHKBQ93100 1093 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 MKL1Q969V6 931 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 CCDC47Q96A33 483 aaKnown RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 PNKPQ96T60 521 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 NUP88Q99567 741 aaPredicted RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 UBAC1Q9BSL1 405 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 CRACR2AQ9BSW2 395 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 DESI2Q9BSY9 194 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 MRPL4Q9BYD3 311 aaKnown RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 THAP9Q9H5L6 903 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 TRIM39Q9HCM9 518 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 LZTFL1Q9NQ48 299 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 SH3GLB2Q9NR46 395 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 SAMSN1Q9NSI8 373 aaKnown RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 RNF14Q9UBS8 474 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 RSPH14Q9UHP6 348 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 LUC7L2Q9Y383 392 aaKnown RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 SAR1BQ9Y6B6 198 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 PTCH2Q9Y6C5 1203 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 TOGARAM1Q9Y4F4 1720 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 PDS5AQ29RF7 1337 aaKnown RBP3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 ZNF532Q9HCE3 1301 aa3.89□□□□□ -1.79
RNU6-55P-201ENST00000411092 COL5A2P05997 1499 aaPredicted RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 A0A0G2JLW4 131 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 SHTN1A0MZ66 631 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ERVV-1B6SEH8 477 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 KCNJ18B7U540 433 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 PSMA7O14818 248 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 PDE8AO60658 829 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 IDH1O75874 414 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 PRPF6O94906 941 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 NDUFA10O95299 355 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 STARD3NLO95772 234 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 APEX1P27695 318 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 HNRNPH3P31942 346 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 KRT9P35527 623 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ARHGAP25P42331 645 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 TDO2P48775 406 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 COPB1P53618 953 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 VSNL1P62760 191 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ALDH6A1Q02252 535 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ORC2Q13416 577 aaPredicted RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ADAM15Q13444 863 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 FHL2Q14192 279 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 KCNJ12Q14500 433 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 GRM7Q14831 915 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 KRT31Q15323 416 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 LSM12Q3MHD2 195 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 COBLL1Q53SF7 1204 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 C2orf27AQ580R0 203 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 CCDC178Q5BJE1 867 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 TCP11X2Q5H9J9 407 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 TTC38Q5R3I4 469 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ALS2CLQ60I27 953 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ISM2Q6H9L7 571 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 EMBQ6PCB8 327 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 LDHAL6AQ6ZMR3 332 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 B4GALNT4Q76KP1 1039 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 OTOP1Q7RTM1 612 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 YTHDF3Q7Z739 585 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 CATIPQ7Z7H3 387 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 TADA2BQ86TJ2 420 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 RTN4RL1Q86UN2 441 aaPredicted RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 SLC35F6Q8N357 371 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 LILRB2Q8N423 598 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 MMGT1Q8N4V1 131 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 EIF1ADQ8N9N8 165 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 SPATA5Q8NB90 893 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 C3orf20Q8ND61 904 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 SHCBP1Q8NEM2 672 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 TRIM58Q8NG06 486 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 IL17DQ8TAD2 202 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ZCRB1Q8TBF4 217 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 FOXRED1Q96CU9 486 aaPredicted RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 TMEM176AQ96HP8 235 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 DHTKD1Q96HY7 919 aaPredicted RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 AK8Q96MA6 479 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 AIFM3Q96NN9 605 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 PLEKHG4BQ96PX9 1271 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 ALS2CR12Q96Q35 445 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 MED15Q96RN5 788 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 EIF3CQ99613 913 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 MENTQ9BUN1 341 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 BOCQ9BWV1 1114 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 PUS3Q9BZE2 481 aaKnown RBP3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 EDEM3Q9BZQ6 932 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 NELFAQ9H3P2 528 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 FAM204AQ9H8W3 233 aa3.88□□□□□ -1.79
RNU6-55P-201ENST00000411092 AGO3Q9H9G7 860 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms