RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 DNMT3BQ9UBC3 853 aaKnown RBP4.78□□□□□ -1.64
RNU2-28P-201ENST00000410457 GJD2Q9UKL4 321 aa4.78□□□□□ -1.64
RNU2-28P-201ENST00000410457 LRRFIP2Q9Y608 721 aaKnown RBP4.78□□□□□ -1.64
RNU2-28P-201ENST00000410457 RAD54BQ9Y620 910 aa4.78□□□□□ -1.64
RNU2-28P-201ENST00000410457 CDY1Q9Y6F8 540 aa4.78□□□□□ -1.64
RNU2-28P-201ENST00000410457 DUSP10Q9Y6W6 482 aa4.78□□□□□ -1.64
RNU2-28P-201ENST00000410457 SPATA31A3Q5VYP0 1347 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 A0A1B0GTW7 788 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 LEFTY2O00292 366 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TRIM38O00635 465 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 FOXS1O43638 330 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 KCNA2P16389 499 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 MST1P26927 711 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 CNR2P34972 360 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 GCLCP48506 637 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 PXNP49023 591 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 KRT17Q04695 432 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 NSUN2Q08J23 767 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 POSTNQ15063 836 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TRIM71Q2Q1W2 868 aaKnown RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZNF750Q32MQ0 723 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TBC1D10BQ4KMP7 808 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TSHZ3Q63HK5 1081 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 SPTY2D1Q68D10 685 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 LIN54Q6MZP7 749 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TAF2Q6P1X5 1199 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 LAYNQ6UX15 382 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 CYP26C1Q6V0L0 522 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 SPOCD1Q6ZMY3 1216 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 MMS22LQ6ZRQ5 1243 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 CIR1Q86X95 450 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 CCDC28AQ8IWP9 274 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 FAM9AQ8IZU1 332 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 OR56A1Q8NGH5 318 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 DCLRE1CQ96SD1 692 aaKnown RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 SLC46A2Q9BY10 475 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 PCDHAC1Q9H158 963 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 C9orf78Q9NZ63 289 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 VSX1Q9NZR4 365 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 HSFX1Q9UBD0 423 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZMYND8Q9ULU4 1186 aaPredicted RBP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 TBC1D30Q9Y2I9 924 aa4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.77□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZNF536O15090 1300 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 OR2W5A6NFC9 320 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 CAPN14A8MX76 684 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 HMGB1P1B2RPK0 211 aaPredicted RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 PIP5K1BO14986 540 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 GPR42O15529 346 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ITGA2BP08514 1039 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 SPATA31D3P0C874 917 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 NPPBP16860 134 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ITGALP20701 1170 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 COMTP21964 271 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 PPIFP30405 207 aaKnown RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ANXA11P50995 505 aaKnown RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 DGKEP52429 567 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZNF134P52741 427 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 LILRA4P59901 499 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZIK1Q3SY52 487 aaPredicted RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ARHGAP15Q53QZ3 475 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 FAXCQ5TGI0 409 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 JMJD6Q6NYC1 403 aaPredicted RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 LVRNQ6Q4G3 990 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 SPATA31D4Q6ZUB0 917 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 USP49Q70CQ1 688 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZNF280BQ86YH2 543 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 LRRC56Q8IYG6 542 aaPredicted RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 IL17REQ8NFR9 667 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 BPIFB1Q8TDL5 484 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 STYXQ8WUJ0 223 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 LRIG1Q96JA1 1093 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZNF668Q96K58 619 aaPredicted RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 FAM227BQ96M60 508 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 MNTQ99583 582 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 PRPF18Q99633 342 aaKnown RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 PTDSS2Q9BVG9 487 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 SORBS1Q9BX66 1292 aaKnown RBP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 GPR87Q9BY21 358 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 ZCWPW1Q9H0M4 648 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 CHST2Q9Y4C5 530 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 DTNAQ9Y4J8 743 aa4.76□□□□□ -1.65
RNU2-28P-201ENST00000410457 A0A1W2PS29 197 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 PATE3B3GLJ2 98 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 IPO5O00410 1097 aaKnown RBP4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 TRIM24O15164 1050 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 NCAM2O15394 837 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 ASNA1O43681 348 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 COQ9O75208 318 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 PIAS2O75928 621 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 SUN1O94901 812 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 HLA-DOAP06340 250 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 CHRM3P20309 590 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 KCNA3P22001 575 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 FGFR4P22455 802 aa4.75□□□□□ -1.65
RNU2-28P-201ENST00000410457 ATICP31939 592 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms