RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 KRT4P19013 534 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 MYL6P60660 151 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 RNASELQ05823 741 aaKnown RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 ACAP1Q15027 740 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 ZNF276Q8N554 614 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 ACTL9Q8TC94 416 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 SPOCK2Q92563 424 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 SLC7A6OSQ96CW6 309 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 TLE6Q9H808 572 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 WDR35Q9P2L0 1181 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 LNPEPQ9UIQ6 1025 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 OGTO15294 1046 aa17.52■□□□□ 0.4
LIMS2-208ENST00000410011 RPSAP08865 295 aaKnown RBP17.52■□□□□ 0.4
LIMS2-208ENST00000410011 LVRNQ6Q4G3 990 aa17.52■□□□□ 0.4
LIMS2-208ENST00000410011 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
LIMS2-208ENST00000410011 SLC5A4Q9NY91 659 aa17.52■□□□□ 0.4
LIMS2-208ENST00000410011 CPSF3Q9UKF6 684 aaKnown RBP17.52■□□□□ 0.4
LIMS2-208ENST00000410011 IFNB1P01574 187 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 KDELR1P24390 212 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 OTUD4Q01804 1114 aaKnown RBP17.52■□□□□ 0.39
LIMS2-208ENST00000410011 FYB2Q5VWT5 728 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 CDCA2Q69YH5 1023 aaPredicted RBP17.52■□□□□ 0.39
LIMS2-208ENST00000410011 C3orf62Q6ZUJ4 267 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 TFAP2BQ92481 460 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 THOC1Q96FV9 657 aaKnown RBP17.52■□□□□ 0.39
LIMS2-208ENST00000410011 TUBB6Q9BUF5 446 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.39
LIMS2-208ENST00000410011 SCAF8Q9UPN6 1271 aaKnown RBP17.52■□□□□ 0.39
LIMS2-208ENST00000410011 DIAPH2O60879 1101 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 LRCH4O75427 683 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 KRT3P12035 628 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 PSMA2P25787 234 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 RFC1P35251 1148 aaPredicted RBP17.51■□□□□ 0.39
LIMS2-208ENST00000410011 WASHC2DQ5SRD0 308 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 SCARA3Q6AZY7 606 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 ARFGAP1Q8N6T3 406 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 BANPQ8N9N5 519 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 CMASQ8NFW8 434 aaPredicted RBP17.51■□□□□ 0.39
LIMS2-208ENST00000410011 ACO2Q99798 780 aaKnown RBP17.51■□□□□ 0.39
LIMS2-208ENST00000410011 MTMR12Q9C0I1 747 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
LIMS2-208ENST00000410011 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 ABLIM1O14639 778 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 MED7O43513 233 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 CST8O60676 142 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 RPL22P35268 128 aaKnown RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 TNFSF9P41273 254 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 TRPC3Q13507 836 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 TFDP1Q14186 410 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 HP1BP3Q5SSJ5 553 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 FNBP1LQ5T0N5 605 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 IER5Q5VY09 327 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 CHST13Q8NET6 341 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 PCYT2Q99447 389 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 PAFAH2Q99487 392 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 XYLT2Q9H1B5 865 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 RNPEPL1Q9HAU8 725 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 PICK1Q9NRD5 415 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 STK32BQ9NY57 414 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 LIN7AO14910 233 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 GAS2O43903 313 aaKnown RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 FAM155BO75949 473 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 IL1BP01584 269 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 DPEP1P16444 411 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 GNAZP19086 355 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 IBSPP21815 317 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 CALB2P22676 271 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 ASPAP45381 313 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 PDIK1LQ8N165 341 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 ENDOVQ8N8Q3 282 aaKnown RBP17.5■□□□□ 0.39
LIMS2-208ENST00000410011 DCAKDQ8WVC6 231 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 RSAD2Q8WXG1 361 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 HAUS1Q96CS2 278 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 HAO1Q9UJM8 370 aa17.5■□□□□ 0.39
LIMS2-208ENST00000410011 LOC285556D6RIA3 1793 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 APOC4-APOC2K7ER74 178 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 B4GALT4O60513 344 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 TGDSO95455 350 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 APOC2P02655 101 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 TROVE2P10155 538 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIMS2-208ENST00000410011 FGFR1P11362 822 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 TARSP26639 723 aaKnown RBP17.49■□□□□ 0.39
LIMS2-208ENST00000410011 PTPN4P29074 926 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 SSTR1P30872 391 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 STIP1P31948 543 aaKnown RBP17.49■□□□□ 0.39
LIMS2-208ENST00000410011 GDF10P55107 478 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 PTPN20Q4JDL3 420 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 MSS51Q4VC12 460 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 SEZ6Q53EL9 994 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 ANKRD20A2Q5SQ80 823 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 NBPF12Q5TAG4 269 aaPredicted RBP17.49■□□□□ 0.39
LIMS2-208ENST00000410011 ANKRD20A1Q5TYW2 823 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 ANKRD20A3Q5VUR7 823 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 ANKRD22Q5VYY1 191 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 FAM160B1Q5W0V3 765 aa17.49■□□□□ 0.39
LIMS2-208ENST00000410011 NLRP9Q7RTR0 991 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms