RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NT5C1AQ9BXI3 368 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ASAH2Q9NR71 780 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 MRPS23Q9Y3D9 190 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 KCNJ18B7U540 433 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ZNF197O14709 1029 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 TRIM21P19474 475 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 BDNFP23560 247 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 TBXAS1P24557 533 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 EEF1GP26641 437 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 GBP2P32456 591 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 LRMPQ12912 555 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 KCNJ12Q14500 433 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 MAN2A1Q16706 1144 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 SLC5A9Q2M3M2 681 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 HSP90AA4PQ58FG1 418 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 GET4Q7L5D6 327 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ITFG1Q8TB96 612 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 WHAMMQ8TF30 809 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 NT5C1BQ96P26 610 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 MYADMQ96S97 322 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 TUBGCP2Q9BSJ2 902 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 B3GNT5Q9BYG0 378 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ELOVL4Q9GZR5 314 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 DNAI2Q9GZS0 605 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 NAT10Q9H0A0 1025 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 CISHQ9NSE2 258 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 EPS15L1Q9UBC2 864 aa21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 ZFP37Q9Y6Q3 630 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-207ENST00000409417 DENND4AQ7Z401 1863 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 MICAL2O94851 1124 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 MYL5Q02045 173 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 ORC1Q13415 861 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 DDR2Q16832 855 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 TCP11X2Q5H9J9 407 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 PRSS36Q5K4E3 855 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 CDKAL1Q5VV42 579 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 PDZD4Q76G19 769 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 HS6ST3Q8IZP7 471 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 GIPC2Q8TF65 315 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 FGF13Q92913 245 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 TWNKQ96RR1 684 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 LRRC3Q9BY71 257 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 CDH7Q9ULB5 785 aa21.12■□□□□ 0.97
PDLIM2-207ENST00000409417 NOTCH4Q99466 2003 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 GTPBP10A4D1E9 387 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 TNFRSF10AO00220 468 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 LAMP2P13473 410 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 GPR15P49685 360 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 YWHAEP62258 255 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 TMC8Q8IU68 726 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 RNF135Q8IUD6 432 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 SCN4BQ8IWT1 228 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 GPR152Q8TDT2 470 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 CEP295NLQ96MC4 621 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 ZNF518BQ9C0D4 1074 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 INTS2Q9H0H0 1204 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 FANCLQ9NW38 375 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 GCNT4Q9P109 453 aa21.11■□□□□ 0.97
PDLIM2-207ENST00000409417 ATP8B3O60423 1300 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 DLL1O00548 723 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 FGF19O95750 216 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 MYL4P12829 197 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 PRKCSHP14314 528 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 GRIK1P39086 918 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 CCR2P41597 374 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 GCNT1Q02742 428 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 TAF12Q16514 161 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 ANO6Q4KMQ2 910 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 VWA3BQ502W6 1294 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 SDHAF4Q5VUM1 108 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 NPAS3Q8IXF0 933 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 FUKQ8N0W3 1084 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 C12orf29Q8N999 325 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 TCEAL4Q96EI5 215 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 CRACR2AQ9BSW2 395 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 NDST4Q9H3R1 872 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 GDE1Q9NZC3 331 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 LIMD1Q9UGP4 676 aa21.1■□□□□ 0.97
PDLIM2-207ENST00000409417 DOCK8Q8NF50 2099 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 SYCE3A1L190 88 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 CLDN5O00501 218 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 TRIM66O15016 1216 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 CSH1P0DML2 217 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 CSH2P0DML3 217 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 HMGA1P17096 107 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 MIIPQ5JXC2 388 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 GBP6Q6ZN66 633 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 PAQR9Q6ZVX9 377 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 PPM1KQ8N3J5 372 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 SPATA17Q96L03 361 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 C8orf48Q96LL4 319 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 BPIFA3Q9BQP9 254 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 FUCA2Q9BTY2 467 aa21.09■□□□□ 0.97
PDLIM2-207ENST00000409417 F8VP50 259 aa21.08■□□□□ 0.97
PDLIM2-207ENST00000409417 CEBPBP17676 345 aa21.08■□□□□ 0.97
PDLIM2-207ENST00000409417 ANXA13P27216 316 aa21.08■□□□□ 0.97
PDLIM2-207ENST00000409417 RAD23BP54727 409 aa21.08■□□□□ 0.97
PDLIM2-207ENST00000409417 NCAPHQ15003 741 aa21.08■□□□□ 0.97
PDLIM2-207ENST00000409417 EXOC3L4Q17RC7 722 aa21.08■□□□□ 0.97
PDLIM2-207ENST00000409417 ZNF394Q53GI3 561 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms